Data_Sheet_3_Tutorial: calibration refinement in quantum annealing.ZIP حسب Kevin Chern (16989258)

"…We conclude the tutorial by surveying additional methods, providing practical implementation tips, and discussing limitations and remedies of the calibration procedure. …"

Analytic methods trends—all categories—part 2. حسب Taylor Bolt (11205577)

"…The time series of each analytic method category is displayed in its own plot with different y-axis scales. Note that <i>because each plot differs in y-axis scale</i>, <i>caution should be observed when comparing trends across categories</i>. …"

Analytic methods trends—all categories—part 1. حسب Taylor Bolt (11205577)

"…The time series of each analytic method category is displayed in its own plot with different y-axis scales. Note that because each plot differs in y-axis scale, caution should be observed when comparing trends across categories. …"

The global dryland lake storage (GDLS) dataset حسب Gang Zhao (18368925)

"…</b><b>ipynb</b><br>A Python example to show the location of a given lake and to plot monthly time series of area/elevation/storage for this lake.…"

Influenza and Norovirus Incidence and Optical Flow activity video material for 2008-2018 حسب Simon Fraas (8335971)

"…<br></div><div><br></div><div>Excerpt from the material and methods regarding these videos: Incidence plots were generated with a jupyter notebook based script (with Matplotlib 3.1.1 in Python 3.750). …"

Search-based testing (Genetic Algorithm) - Chapter 11 of the book "Software Testing Automation" حسب Saeed Parsa (13893726)

"…Algorithm</p> <p>Below is the main body of the test data generator program:</p> <p>  </p> <p>the main body of a Python program to generate test data for Python functions.…"

Digital Twin for Chemical Sciences حسب Jin Qian (19339035)

"…Lastly, we use the Figure 4.ipynb notebook in the 3_outputs folder to plot the subfigures in d), e), f). Observing that Basin Hopping performs better than Gaussian Process, we plot the degeneracy result with 0.1 error cutoff to obtain the subfigures in g), h), i). …"

Minami_etal_2025 حسب Keiichi Mochida (4670800)

"…<h2>Code files related to Minami et al (2025)</h2><p dir="ltr">accession_plot.py:Python script used to generate Fig4a.</p><p dir="ltr">Bd21-3_Bd21.Rmd:R script (mrkdown) used to run rQTL and generte Supplementary Fig. 3c (Bd21-3 x Bd21)</p><p dir="ltr">.…"

Supplementary material to the journal article:  An active learning framework and assessment of inter-annotator agreement facilitate automated recogniser development for vocalisatio... حسب John van Osta (15795974)

"…The steps to setup a python environment in Visual Studio Code are described here: https://code.visualstudio.com/docs/python/environments, or more generally for python described here: https://packaging.python.org/en/latest/guides/installing-using-pip-and-virtual-environments/. …"

Oka et al., Supplementary Data for "Development of a battery emulator using deep learning model to predict the charge–discharge voltage profile of lithium-ion batteries" حسب Kanato Oka (20132185)

"…For a single file, test data is read, and the prediction plot is output. To use this Python script, you need to modify the "CFG (config)" and "Convenient" sections within the script.…"

Endosymbionts proteins have extreme compositional biases. حسب John P. McCutcheon (18389775)

"…<p>A principal component analysis (PCA) of amino acid frequencies from 98,966 bacterial and archaeal genomes. Each dot represents an amino acid profile from a single genome. …"

Decentralised cognitive radio networks حسب Arun Sivakumaran (9437330)

"…The datasets are stored as Python pickle data objects, and can be parsed into data structures using the code "results_plot.py". …"

Evolution of GCC and k-cores over the quarantine. حسب Matteo Serafino (11599593)

"…Visible is the high betweenness centrality node representing the weak-link of this k-core. <b>(D)</b> We plot the location of the contacts in the map of Fortaleza constituting the components of the 5-core of the April 28 in <b>(C)</b>. …"

A decade of analytic method trends (2009–2020). حسب Taylor Bolt (11205577)

"…The time series of each analytic method category is displayed in its own plot with different y-axis scales. Note that because each plot differs in y-axis scale, caution should be observed when comparing trends across categories. …"

The experimental fitness landscape at the intersection of two genotype networks. حسب Devin P. Bendixsen (6743501)

"…<p>(A) Overlay of the HDV and Ligase genotype networks. Nodes represent individual genotypes that are connected by an edge if they are different by a single nucleotide change. …"

Demonstration of Isosteric Heat of Adsorption Calculation using AIFs and pyGAPs حسب Jack Evans (11275386)

"…</p><p dir="ltr">The calculation is performed using the Clausius-Clapeyron method as implemented in the <code><strong>pyGAPS</strong></code> Python library for adsorption science. …"

Gravity inversion as a method to recover sub-ice shelf bathymetry; applied to the Ross Ice Shelf حسب Matt Tankersley (11769215)

"…Here, we implement this workflow to airborne gravity data from the Ross Ice Shelf and model the underlying bathymetry. …"

Bacterial persistence modulates the speed, magnitude and onset of antibiotic resistance evolution حسب Giorgio Boccarella (22810952)

"…</p><p dir="ltr">complete_data.xlsx</p><p dir="ltr">A single Excel file containing 18 sheets with data from all figures:</p><p dir="ltr">Sheet names and descriptions:</p><ul><li>Fig_1: Probability of emergence contour data</li><li>Fig_2_b: MIC evolution simulation data</li><li>Fig_2_c: Speed of resistance evolution data</li><li>Fig_2_d: Time to resistance data</li><li>Fig_2_a_d_time_series_sim7: Simulation time series data (representative simulation, low persistence)</li><li>Fig_2_a_d_MIC_values_sim7: MIC values from simulation (representative simulation, low persistence)</li><li>Fig_2_a_p_time_series_sim5: Simulation time series data (representative simulation, high persistence)</li><li>Fig_2_a_p_MIC_values_sim5: MIC values from simulation (representative simulation, high persistence)</li><li>Fig_3_a-b: Distribution plot simulation data</li><li>Fig_3_a-b_empirical: Distribution plot empirical data</li><li>Fig_4_a: Mutation count simulation data</li><li>Fig_4_b: Mutation count empirical data</li><li>Fig_4_c: Mutation functional data</li><li>Fig_5_a-b: Large-scale simulation results (heatmap data)</li><li>Fig_5_c_mic: MIC heatmap empirical data</li><li>Fig_5_c_extinction: Extinction heatmap empirical data</li><li>Fig_6: Population size analysis simulation data</li><li>S1_figure: Supplementary experimental survival data</li></ul><p dir="ltr">Column naming convention</p><p dir="ltr">All sheets use consistent, tidy column names.…"

EllipSys3D large eddy simulation data of single wind turbine wakes in neutral atmospheric conditions حسب Paul van der Laan (6222017)

"…<br></div><br>An example Python script, read_netcfd_and_plot.py, is provided which can read and plot the LES data. …"

Table_1_CBP-JMF: An Improved Joint Matrix Tri-Factorization Method for Characterizing Complex Biological Processes of Diseases.xlsx حسب Bingbo Wang (517732)

"…Differently from existing methods, CBP-JMF is based on a joint non-negative matrix tri-factorization framework and is implemented in Python. As a pragmatic application, we apply CBP-JMF to identify CBPs for four subtypes of breast cancer. …"