Genomic Surveillance of Pemivibart (VYD2311) Escape-Associated Mutations in SARS-CoV-2: December 2025 BioSamples (n=2) حسب Tahir Bhatti (20961974)

"…</p><p dir="ltr"><b>Note:</b></p><p dir="ltr">Analysis was performed using a custom Python-based bioinformatics pipeline developed for <b>high-throughput surveillance of pemivibart (VYD2311) escape mutations in SARS-CoV-2</b>. …"

<b>Dataset for manuscript: </b><b>Phylogenetic and genomic insights into the evolution of terpenoid biosynthesis genes in diverse plant lineages</b> حسب Puguang Zhao (19023065)

"…</p><p dir="ltr"> 'boxplot.py': This script is executed in Visual Studio Code, using Python 3.10.4 as the runtime environment.…"

From GIS to HBIM and Back: Multiscale Performance and Condition Assessment for Networks of Public Heritage Buildings and Construction Components حسب Teresa Fortunato (21076099)

"…This case study demonstrates the outcomes and potential applications of the proposed framework, contributing to the debate on its implications for enhancing contemporary heritage evaluation and management practices.…"

(A) Sampling locations and ranges of <i>I. feisthamelii</i> (purple) and <i>I. podalirius</i> (teal) butterflies. حسب Sam Ebdon (21072525)

"…(B) Sampling locations of butterflies from the <i>Iphiclides</i> HZ. The dashed line represents the approximate HZ center, based on samples collected by Lafranchis et al. …"

Oka et al., Supplementary Data for "Development of a battery emulator using deep learning model to predict the charge–discharge voltage profile of lithium-ion batteries" حسب Kanato Oka (20132185)

"…(<b>DOI:</b> 10.1038/s41598-024-80371-9 )<br><br>A zip file contains following data and codes.</p><p dir="ltr"><br></p><p dir="ltr">01_lstm_model_making.py</p><p dir="ltr">This file is a Python script for reading battery charge-discharge data and training an LSTM model. …"

Social media images of China's terraces حسب Song Chen (19488280)

"…Geo-tagged images were collected using Weibo cookies and Python-based scraping tools (available at: https://github.com/dataabc/weibo-search). …"

Bacterial persistence modulates the speed, magnitude and onset of antibiotic resistance evolution حسب Giorgio Boccarella (22810952)

"…This file can be used together with the analysis code (link to be added upon publication) to generate all figures.…"

Data Sheet 1_Nationwide epidemiological study of subarachnoid hemorrhage: trends in admissions, mortality, seasonality, costs, clipping, embolization, and the impact of COVID-19.pd... حسب Thiago Oscar Goulart (22485604)

"…</p>Methods<p>This retrospective study analyzed secondary data from the Brazilian public health system (DataSUS) using ICD-10 code I60 for aSAH. Key metrics included the evaluation of admissions with time-series in Python, and mortality rates, procedures, and costs.…"

Reproducible visualization strategies for spatially varying coefficient (SVC) models: incorporating uncertainty and assessing replicability حسب Victor Irekponor (22303109)

"…This study introduces <i>svc-viz</i>, an open-source Python tool that codifies best practices into a standardized framework for interpreting and communicating SVC model results. …"

2024 HUD Point in Time Count Data by State and CoC with Serious Mental Illness and Chronic Substance Use Counts حسب Benjamin Gorman (21648794)

"…</p><p dir="ltr">HUD PIT Count reports for states, Washington, DC, and the 384 CoCs were systematically downloaded from the HUD Exchange website using a Python script developed using Cursor software. Cursor uses large language models, especially Claude Sonnet 4 (Anthropic), to generate code. …"

Electrical Tactile Dataset (Piezoelectric and Accelerometer) for textures حسب Dexter Shepherd (13238508)

"…</p><p dir="ltr">X shape: (Number, frame, sensor index)</p><p dir="ltr">y shape: (Number,)</p><p dir="ltr">All files are in compressed numpy format. Python users can load in the dataset using the code provided in the ReadMe.…"

Advancing Solar Magnetic Field Modeling حسب Carlos António (21257432)

"…<br><br>We developed a significantly faster Python code built upon a functional optimization framework previously proposed and implemented by our team. …"

Phylogenomics of aquatic bacteria حسب Krzysztof Jurdzinski (12519700)

"…</p> <p><br></p> <p>all_MSG_ids.txt - a text file with names of all the representative MAGs within all the MSG pairs.</p> <p><br></p> <p>filter_MSGs.py - a Python script to extract the MAGs from within the MSGs (given all_MSG_ids.txt) from a folder containing a larger set of sequences.…"

Optical Tactile (TacTip) Dataset for texture classification حسب Dexter Shepherd (13238508)

"…</p><p dir="ltr">X shape: (Number, frame, h, w)</p><p dir="ltr">y shape: (Number,)</p><p dir="ltr"><br></p><p dir="ltr">All files are in compressed numpy format. Python users can load in the dataset using the code provided in the ReadMe.…"

Improving the calibration of an integrated CA-What If? digital planning framework حسب CA What If? (21381170)

"…</p><p dir="ltr">This dataset includes (1) all required data for reproducing the materials within the manuscript, (2) detailed Python codes of the proposed CA-What If? model, and (3) a step-by-step instruction document.…"

Building footprtints from 1970s Hexagon spy satellite images for four global urban growth hotspots حسب Franz Schug (10165159)

"…</p> <p><strong>Processing environment</strong></p> <p>This research has been conducted using Python for ESRI ArcGIS Pro version 3.2.1 and the TensorFlow package. …"

<b>Challenges and Strategies for the Management of Quality-Oriented Education Bases in Universities under Informatization Background</b> حسب Yang Yanxi (21571568)

"…Final codes, together with basic demographic attributes supplied by the institutions’ HR offices, were exported to Excel and cleaned in Python 3.10 using pandas 2.2.1 and numpy 1.26. …"

<b>Engineered Muscle-Derived Extracellular Vesicles Boost Insulin Sensitivity and Glucose Regulation</b> حسب Hagit Shoyhet (21090650)

"…</p><p dir="ltr"><b>miR_path_target_enrichment.csv</b></p><p dir="ltr"><b>Description:</b> KEGG pathway enrichment analysis results of shared mRNA targets of miRNAs miR-16-5p, miR-122-5p and miR-486-5p ranked by their interaction score defined in our paper. this includes the pathway name, the enrichment p-value, number of genes found in the term and number of miRNAs targeting these genes</p><p dir="ltr"><b>Code/software</b></p><p dir="ltr">Data were analyzed using R-V4.0.4, Python-V3.9.2 and GraphPad software. miRNA analyses were run in R-V4.0.4 Differential expression analysis was conducted using the “DEseq2” package and corrected for multiple hypotheses by FDR. …"

Chromosomal rearrangements among clade A pathogenic <i>Cryptococcus</i> species. حسب Marco A. Coelho (7353659)

"…<p>(A) Synteny comparisons between <i>C. neoformans</i> strain 125.91 (reference) and representative strains from 7 other clade A species (8 species total). …"

PepENS حسب Abel Chandra (16854753)

"…<br><br>Download and Use</p><p dir="ltr">The codes for Datasets 1 and 2 are found in the respective folders of this repository.…"