Advancing Solar Magnetic Field Modeling by Carlos António (21257432)

“…<br><br>We developed a significantly faster Python code built upon a functional optimization framework previously proposed and implemented by our team. …”

Knowledge Graph validation using SHACL Shapes by Ángel Iglesias Préstamo (19745767)

“…Leveraging Rust’s performance and safety features, rudof provides efficient validation tools and Python bindings for integration with data science workflows. …”

Tracking when the number of individuals in the video frame changes. by Hirotsugu Azechi (20700528)

“…The diagram illustrates changes across different experimental conditions, with plots indicating the frequency for each keypoint and bars representing each ID pair. …”

Sonification of Warming Stripes by Christopher Harrison (9448751)

“…A zip file containing all of the scripts (in the form of Python Jupyter notebooks) that were used to produce the sonification, and the plots for the explanation article (Sonification Warming Stripes.pdf). …”

Genomic Surveillance of Pemivibart (VYD2311) Escape-Associated Mutations in SARS-CoV-2: December 2025 BioSamples (n=2) by Tahir Bhatti (20961974)

“…The pipeline integrates established open-source tools (fastp, BWA-MEM, samtools, iVar, bcftools) and implements <b>codon-aware mutation calling</b> at five canonical RBD positions (R346, S371, K444, F456, F486) relative to NC_045512.2. …”

OHID-FF dataset for forest fire detection and classification by xin chen (20496938)

“…If you add scripts or tools that change dataset paths or formats, please update `YOLODataset/dataset.yaml` and this README accordingly.…”

Void-Center Galaxies and the Gravity of Probability Framework: Pre-DESI Consistency with VGS 12 and NGC 6789 by Jordan Waters (21620558)

“…<br><br><br><b>ORCID ID: https://orcid.org/0009-0009-0793-8089</b><br></p><p dir="ltr"><b>Code Availability:</b></p><p dir="ltr"><b>All Python tools used for GoP simulations and predictions are available at:</b></p><p dir="ltr"><b>https://github.com/Jwaters290/GoP-Probabilistic-Curvature</b><br><br>The Gravity of Probability framework is implemented in this public Python codebase that reproduces all published GoP predictions from preexisting DESI data, using a single fixed set of global parameters. …”

<b>Rethinking neighbourhood boundaries for urban planning: A data-driven framework for perception-based delineation</b> by Shubham Pawar (22471285)

“…Each color represents a distinct cluster.</p><p dir="ltr"><b>Code to generate:</b></p><pre><pre>import geopandas as gpd<br>import matplotlib.pyplot as plt<br><br>gdf = gpd.read_file('.…”

Elements: Streaming Molecular Dynamics Simulation Trajectories for Direct Analysis – Applications to Sub-Picosecond Dynamics in Microsecond Simulations by Matthias Heyden (17087794)

“…This eliminates the need for intermediate storage and allows immediate access to high-frequency fluctuations and vibrational signatures that would otherwise be inaccessible. We have implemented this streaming interface in the MD engines NAMD, LAMMPS, and GROMACS</p><p dir="ltr">On the client side, we developed the IMDClient Python package which receives the streamed data, stores into a custom buffer, and provides it to external tools as NumPy arrays, facilitating integration with scientific computing workflows. …”

Scripts for pairwise nucleotide identity graphs by NEIL YOUNG (1140230)

“…Next, a pairwise nucleotide distance matrix was built using a custom python script is available in this folder entitled 'distance'. …”

(A) Sampling locations and ranges of <i>I. feisthamelii</i> (purple) and <i>I. podalirius</i> (teal) butterflies. by Sam Ebdon (21072525)

“…(B) Sampling locations of butterflies from the <i>Iphiclides</i> HZ. The dashed line represents the approximate HZ center, based on samples collected by Lafranchis et al. …”

Research Database by Ana Paula Fermiano (22439479)

“…</p><p dir="ltr">Statistical analysis was conducted through <b>multiple regression models</b> implemented in <b>Jamovi</b>, supported by Geographic Information System (GIS) tools to visualize spatial patterns. …”

Landscape Change Monitoring System (LCMS) Conterminous United States Cause of Change (Image Service) by U.S. Forest Service (17476914)

“…Scikit-learn: Machine Learning in Python. In Journal of Machine Learning Research (Vol. 12, pp. 2825-2830).Pengra, B. …”

VPS13C contributes to ER-SCV contact formation. by Anna K. Waldmann (22250729)

“…<p>a, Representative images of random 2D TEM sections of <i>VPS13C</i> KO and control HeLa cells. …”

<b>Engineered Muscle-Derived Extracellular Vesicles Boost Insulin Sensitivity and Glucose Regulation</b> by Hagit Shoyhet (21090650)

“…Proteomic analyses were run with Python-V3.9.2 miRNA and protein figures were plotted using R</p>…”

Code by Baoqiang Chen (21099509)

“…</p><p><br></p><p dir="ltr">For the 5′ UTR library, we developed a Python script to extract sequences and Unique Molecular Identifiers (UMIs) from the FASTQ files. …”

Core data by Baoqiang Chen (21099509)

“…</p><p><br></p><p dir="ltr">For the 5′ UTR library, we developed a Python script to extract sequences and Unique Molecular Identifiers (UMIs) from the FASTQ files. …”

Supplementary Data: Biodiversity and Energy System Planning - Queensland 2025 by Andrew Rogers (17623239)

“…</p><h2>Software and Spatial Resolution</h2><p dir="ltr">The VRE siting model is implemented using Python and relies heavily on ArcGIS for comprehensive spatial data handling and analysis.…”