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code representing » model representing (Expand Search), models representing (Expand Search), tpd representing (Expand Search)
tool implemented » model implemented (Expand Search), study implemented (Expand Search), _ implemented (Expand Search)
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101
Missing and Unaccounted-for People in Mexico (1960s–2025)
Published 2025“…</li><li><b>Requirements File:</b> A <code>requirements.txt</code> file listing the necessary Python libraries to run the script seamlessly.…”
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102
Physiotherapist-Assisted Wrist Movement Protocol for EEG-Based Corticokinematic Coherence Assessment
Published 2025“…</li></ol><h4><b>Movement File Structure</b></h4><p dir="ltr">Each entry contains:</p><ul><li><code><strong>time</strong></code>: a 32-bit unsigned integer indicating the timestamp in milliseconds,</li><li><code><strong>x</strong></code>, <code><strong>y</strong></code>, <code><strong>z</strong></code>: 16-bit signed integers representing acceleration along the respective axes,</li><li><code><strong>trigger</strong></code>: an 8-bit unsigned integer used to mark event-related triggers for synchronization with the EEG data (e.g., movement onset).…”
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103
Cognitive Fatigue
Published 2025“…<br></p><p dir="ltr"><b>HCI features</b> encompass keyboard, mouse, and screenshot data. Below is a Python code snippet for extracting screenshot files from the screenshots CSV file.…”
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104
Methodological Approach Based on Structural Parameters, Vibrational Frequencies, and MMFF94 Bond Charge Increments for Platinum-Based Compounds
Published 2025“…The developed bci optimization tool, based on MMFF94, was implemented using a Python code made available at https://github.com/molmodcs/bci_solver. …”
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105
Multisession fNIRS-EEG data of Post-Stroke Motor Recovery: Recordings During Intact and Paretic Hand Movements
Published 2025“…The fNIRS .snirf files are accompanied by event files as .txt tables, containing arrays of event timestamps and corresponding event codes. The code for signal reading, preprocessing, and epoching is provided with the dataset in the “Preprocessing” file. …”
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106
Digital Twin for Chemical Sciences
Published 2025“…The procedure for generating data in Figure 3 can be found in the demo notebook in Supplementary Code. The procedure for generating data of Figure 4 has been uploaded in fig4_figshare.zip file. …”
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107
Sonification of Warming Stripes
Published 2025“…The sonification was produced using the STRAUSS sonification Python package.</p><p dir="ltr">Here we release:<br>1. …”
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108
Supplementary file 1_ParaDeep: sequence-based deep learning for residue-level paratope prediction using chain-aware BiLSTM-CNN models.docx
Published 2025“…The implementation is freely available at https://github.com/PiyachatU/ParaDeep, with Python (PyTorch) code and a Google Colab interface for ease of use.…”
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109
Supplementary material for "Euler inversion: Locating sources of potential-field data through inversion of Euler's homogeneity equation"
Published 2025“…</p><h2>License</h2><p dir="ltr">All Python source code (including <code>.py</code> and <code>.ipynb</code> files) is made available under the MIT license. …”
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110
Sonification of Growing Black Hole
Published 2024“…We used the open source Python package STRAUSS to produce the sonification (Trayford and Harrison 2023). …”
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111
The artifacts and data for the paper "DD4AV: Detecting Atomicity Violations in Interrupt-Driven Programs with Guided Concolic Execution and Filtering" (OOPSLA 2025)
Published 2025“…</p><pre><pre>sudo apt-get install -y wget git build-essential python3 python python-pip python3-pip tmux cmake libtool libtool-bin automake autoconf autotools-dev m4 autopoint libboost-dev help2man gnulib bison flex texinfo zlib1g-dev libexpat1-dev libfreetype6 libfreetype6-dev libbz2-dev liblzo2-dev libtinfo-dev libssl-dev pkg-config libswscale-dev libarchive-dev liblzma-dev liblz4-dev doxygen libncurses5 vim intltool gcc-multilib sudo --fix-missing<br></pre></pre><pre><pre>pip install numpy && pip3 install numpy && pip3 install sysv_ipc<br></pre></pre><h4><b>Download the Code</b></h4><p dir="ltr">Download <b>DD4AV</b> from the Figshare website to your local machine and navigate to the project directory:</p><pre><pre>cd DD4AV<br></pre></pre><h4><b>Configure Environment and Install the Tool</b></h4><p dir="ltr">For convenience, we provide shell scripts to automate the installation process. …”
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112
World Heritage documents reveal persistent gaps between climate awareness and local action
Published 2025“…The analysis section includes a GLM model implemented in R, along with evaluation tools such as correlation heatmaps, ICC agreement analysis, and MCC-based binary classification assessment. …”
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113
Comprehensive Fluid and Gravitational Dynamics Script for General Symbolic Navier-Stokes Calculations and Validation
Published 2024“…It provides a flexible foundation on which theoretical assumptions can be validated, and practical calculations performed. Implemented in Python with symbolic calculations, the script facilitates in-depth analysis of complex flow patterns and makes advanced mathematical computations more accessible. …”
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114
<b>Rethinking neighbourhood boundaries for urban planning: A data-driven framework for perception-based delineation</b>
Published 2025“…</p><p dir="ltr"><b>Input:</b></p><ul><li><code>svi_module/svi_data/svi_info.csv</code> - Image metadata from Step 1</li><li><code>perception_module/trained_models/</code> - Pre-trained models</li></ul><p dir="ltr"><b>Command:</b></p><pre><pre>python -m perception_module.pred \<br> --model-weights .…”
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115
Overview of generalized weighted averages.
Published 2025“…GWA-UCB1 outperformed G-UCB1, UCB1-Tuned, and Thompson sampling in most problem settings and can be useful in many situations. The code is available at <a href="https://github.com/manome/python-mab" target="_blank">https://github.com/manome/python-mab</a>.…”
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116
Minami_etal_2025
Published 2025“…<h2>Code files related to Minami et al (2025)</h2><p dir="ltr">accession_plot.py:Python script used to generate Fig4a.…”
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117
Genomic Epidemiology of SARS-CoV-2 in Peru from 2020 to 2024
Published 2025“…</p><p dir="ltr"><b>Contents:</b></p><p><b>1. Analysis Code</b></p><p>Core Python scripts used to curate metadata, process genomic data, perform lineage assignments, compute summary statistics, and prepare inputs for downstream phylogenetic and phylogeographic analyses. …”
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118
Tracking when the number of individuals in the video frame changes.
Published 2025“…The removal of unnecessary keypoint data is achieved through a Python code that allows specified ranges of tracking data obtained from DeepLabCut to be rewritten as NaN (no data) (<a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3003002#pbio.3003002.s019" target="_blank">S1 Protocol</a> and <a href="http://www.plosbiology.org/article/info:doi/10.1371/journal.pbio.3003002#pbio.3003002.s010" target="_blank">S10C Fig</a>). …”
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119
Satellite monitoring of Greenland wintertime buried lake drainage
Published 2025“…Buried_lake_drainage_code</p><p dir="ltr">This folder contains two Python Jupyter Notebooks for detecting wintertime buried lake drainages (BLDs). …”
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120
Global Aridity Index and Potential Evapotranspiration (ET0) Database: Version 3.1
Published 2025“…</p><p dir="ltr">The Python programming source code used to run the calculation of ET0 and AI is provided and available online on Figshare at:</p><p dir="ltr">https://figshare.com/articles/software/Global_Aridity_Index_and_Potential_Evapotranspiration_Climate_Database_v3_-_Algorithm_Code_Python_/20005589</p><p dir="ltr">Peer-Review Reference and Proper Citation:</p><p dir="ltr">Zomer, R.J.; Xu, J.; Trabuco, A. 2022. …”