بدائل البحث:
world implementation » policy implementation (توسيع البحث), _ implementation (توسيع البحث)
plot representing » thus representing (توسيع البحث)
python world » python tool (توسيع البحث)
world implementation » policy implementation (توسيع البحث), _ implementation (توسيع البحث)
plot representing » thus representing (توسيع البحث)
python world » python tool (توسيع البحث)
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Plotting histograms depicting phylogenetic branch lengths (in amino acid substitutions per site) between homeologous gene pairs for 13 tetraploid genomes.
منشور في 2025"…<p>Python script used to extract pairwise branch lengths between homeologous gene pairs for 13 tetraploid genomes, and plot them as histograms. …"
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23
Missing Value Imputation in Relational Data Using Variational Inference
منشور في 2025"…Additional results, implementation details, a Python implementation, and the code reproducing the results are available online. …"
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Gene Editing using Transformer Architecture
منشور في 2025"…., the H-Bot sequence), it facilitates on-screen gene editing, enabling targeted mutations or the insertion of desired genes. Implementation requires Python and deep learning frameworks like TensorFlow or PyTorch, with optional use of Biopython for genetic sequence handling. …"
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25
High-throughput chemical genetics screen and titration of hit compounds vinblastine and vincristine.
منشور في 2025"…Scale bar = 100μm. (F) Fiji and Python scripts were used to process, analyze, and plot the high-content high-throughput confocal imaging data. …"
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Digital Twin for Chemical Sciences
منشور في 2025"…Lastly, we use the Figure 4.ipynb notebook in the 3_outputs folder to plot the subfigures in d), e), f). Observing that Basin Hopping performs better than Gaussian Process, we plot the degeneracy result with 0.1 error cutoff to obtain the subfigures in g), h), i). …"
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27
Minami_etal_2025
منشور في 2025"…<h2>Code files related to Minami et al (2025)</h2><p dir="ltr">accession_plot.py:Python script used to generate Fig4a.</p><p dir="ltr">Bd21-3_Bd21.Rmd:R script (mrkdown) used to run rQTL and generte Supplementary Fig. 3c (Bd21-3 x Bd21)</p><p dir="ltr">.…"
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Oka et al., Supplementary Data for "Development of a battery emulator using deep learning model to predict the charge–discharge voltage profile of lithium-ion batteries"
منشور في 2024"…For a single file, test data is read, and the prediction plot is output. To use this Python script, you need to modify the "CFG (config)" and "Convenient" sections within the script.…"
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29
Investigating the far-right online: Using text data to understand online subcultures
منشور في 2025"…While these analytical techniques are new, they are actually fairly easy for social researchers to implement due to the nature of contemporary high-level programming languages such as Python.…"
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Bacterial persistence modulates the speed, magnitude and onset of antibiotic resistance evolution
منشور في 2025"…</p><p dir="ltr">complete_data.xlsx</p><p dir="ltr">A single Excel file containing 18 sheets with data from all figures:</p><p dir="ltr">Sheet names and descriptions:</p><ul><li>Fig_1: Probability of emergence contour data</li><li>Fig_2_b: MIC evolution simulation data</li><li>Fig_2_c: Speed of resistance evolution data</li><li>Fig_2_d: Time to resistance data</li><li>Fig_2_a_d_time_series_sim7: Simulation time series data (representative simulation, low persistence)</li><li>Fig_2_a_d_MIC_values_sim7: MIC values from simulation (representative simulation, low persistence)</li><li>Fig_2_a_p_time_series_sim5: Simulation time series data (representative simulation, high persistence)</li><li>Fig_2_a_p_MIC_values_sim5: MIC values from simulation (representative simulation, high persistence)</li><li>Fig_3_a-b: Distribution plot simulation data</li><li>Fig_3_a-b_empirical: Distribution plot empirical data</li><li>Fig_4_a: Mutation count simulation data</li><li>Fig_4_b: Mutation count empirical data</li><li>Fig_4_c: Mutation functional data</li><li>Fig_5_a-b: Large-scale simulation results (heatmap data)</li><li>Fig_5_c_mic: MIC heatmap empirical data</li><li>Fig_5_c_extinction: Extinction heatmap empirical data</li><li>Fig_6: Population size analysis simulation data</li><li>S1_figure: Supplementary experimental survival data</li></ul><p dir="ltr">Column naming convention</p><p dir="ltr">All sheets use consistent, tidy column names.…"
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Performance Benchmark: SBMLNetwork vs. SBMLDiagrams Auto-layout.
منشور في 2025"…<p>Log–log plot of median wall-clock time for SBMLNetwork’s C++-based auto-layout engine (blue circles, solid fit) and SBMLDiagrams’ implementation of the pure-Python NetworkX spring_layout algorithm (red squares, dashed fit), applied to synthetic SBML models containing 20–2,000 species, with a fixed 4:1 species-to-reaction ratio. …"
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CNG-ARCO-RADAR.pdf
منشور في 2025"…This approach uses a suite of Python libraries, including Xarray (Xarray-Datatree), Xradar, and Zarr, to implement a hierarchical tree-like data model. …"
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Intersection and distinction of essential compounds and targets from 5 primary sources.
منشور في 2025"…<b>(B)</b> UniProt and SwissTarget Prediction-predicted target proteins and 658 actives are intersected using the Jvenn Python to plot the intersection of targets in which Purple represents <i>R. officinalis</i>, Green indicates S. officinalis, Orange represents <b><i>T.…"
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Genomic Surveillance of Pemivibart (VYD2311) Escape-Associated Mutations in SARS-CoV-2: December 2025 BioSamples (n=2)
منشور في 2025"…The samples (SRR36268464, SRR36225071) were retrieved from the NCBI Sequence Read Archive (SRA) and represent publicly available, real-world viral specimens collected during the final month of 2025, <b>the most recent temporal window available at the time of analysis.…"
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Iterative Methods for Vecchia-Laplace Approximations for Latent Gaussian Process Models
منشور في 2024"…All methods are implemented in a free C++ software library with high-level Python and R packages. …"
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<b>Dataset for manuscript: </b><b>Phylogenetic and genomic insights into the evolution of terpenoid biosynthesis genes in diverse plant lineages</b>
منشور في 2025"…</p><p dir="ltr"> Generates a scatter plot with a linear regression line and saves it as 'Correlation_Plot.pdf' (Figure 5D).…"
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Data&Codes.zip
منشور في 2025"…</p><p dir="ltr">To facilitate the widespread use of the proposed framework, we have implemented it as the <b><i>ESLocalIndi</i></b> open-source package in Python, making it easily accessible to geographers. …"
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The artifacts and data for the paper "DD4AV: Detecting Atomicity Violations in Interrupt-Driven Programs with Guided Concolic Execution and Filtering" (OOPSLA 2025)
منشور في 2025"…</li><li><code><strong>realworld_AV</strong></code>: 18 real-world embedded interrupt-driven programs, all written in C, including control software, firmware, and device drivers.…"
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The global dryland lake storage (GDLS) dataset
منشور في 2025"…</b><b>ipynb</b><br>A Python example to show the location of a given lake and to plot monthly time series of area/elevation/storage for this lake.…"
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Interleg coordination in 103 adult <i>Hypsibius exemplaris</i> individuals.
منشور في 2024"…D. Probability density plot of ϕ<sub>C</sub> vs. ϕ<sub>I</sub> for second and third pair legs, n = 4414 strides. …"