PATH has state-of-the-art performance versus previous binding affinity prediction algorithms. by Yuxi Long (11024307)

Subjects:

COMET: A Machine-Learning Framework Integrating Ligand-Based and Target-Based Algorithms for Elucidating Drug Targets by Haojie Wang (3072141)

Subjects:

COMET: A Machine-Learning Framework Integrating Ligand-Based and Target-Based Algorithms for Elucidating Drug Targets by Haojie Wang (3072141)

Subjects:

COMET: A Machine-Learning Framework Integrating Ligand-Based and Target-Based Algorithms for Elucidating Drug Targets by Haojie Wang (3072141)

Subjects:

Hair removal preprocessing using the DullRazor algorithm before image generation. by Mujung Kim (22367223)

PATH⁺ explains tighter binding of carbonic anhydrase II by brinzolamide. by Yuxi Long (11024307)

Subjects:

Decompression algorithm for the proposed HSCRC encoding. by R. Sakthivel (2589547)

PATH (with persistence fingerprint) runs significantly faster than TNet-BP, a representative binding affinity prediction algorithm that uses persistent homology, on larger protein-... by Yuxi Long (11024307)

Subjects:

LSTM auto encoder algorithm illustration. by Hao Zhang (15339)

Optimal Channel Encoding/Decoding Algorithm Design with MATLAB by Saraf Mohaimen Chowdhury (21977243)

“…<p dir="ltr">An optimal channel encoding and decoding algorithm has been designed and implemented in MATLAB to improve data transmission efficiency and adaptability in communication systems.…”

The relevant data file for this article. by Linsha Liu (20378293)

Visualization by PaCMAP [52] shows that persistence fingerprint clusters protein-ligand complexes with similar binding affinity reasonably well, even beyond the training dataset (P... by Yuxi Long (11024307)

Subjects:

An overview of PATH⁺. by Yuxi Long (11024307)

Subjects:

The 10 features captured by persistence fingerprint. by Yuxi Long (11024307)

Subjects:

^aTwo HIV-1 protease mutants bound to inhibitor darunavir (G48V: PDB ID 3cyw [81] & L90M: PDB ID 2f81 [82]). by Yuxi Long (11024307)

Subjects:

Scatter plots of PATH⁺ and our implementation of TNet-BP’s predictions on a held-out, test subset of PDBBind v2020 refined set for one run (90:10 train:test split ratio,... by Yuxi Long (11024307)

Subjects:

Two protein-ligand complexes shown with their persistence fingerprint. by Yuxi Long (11024307)

Subjects:

PATH⁺ correctly predicted a weaker binding affinity for HIV-1 protease with the drug-resistant G48V mutation (right, experimental kcal/mol, PDB ID: 3cyw [81]) bound to d... by Yuxi Long (11024307)

Subjects:

Performance of TNet-BP and PATH⁺ on the PDBBind v2020 refined set shows that PATH⁺ achieves similar performance with TNet-BP while having three orders fewer f... by Yuxi Long (11024307)

Subjects:

Construction of internuclear persistence contours (IPCs). by Yuxi Long (11024307)

Subjects: