Data_Sheet_1_3D U-Net Improves Automatic Brain Extraction for Isotropic Rat Brain Magnetic Resonance Imaging Data.PDF by Li-Ming Hsu (3583076)

“…</p><p>Significant Methodological Contribution: We proposed a deep-learning-based framework to automatically identify the rodent brain boundaries in MRI. …”

Functionalized cerium oxide nanoparticles mitigate the oxidative stress and pro-inflammatory activity associated to the portal vein endothelium of cirrhotic rats by Jordi Ribera (1804411)

“…In addition, CH-iPVECs showed a significant increase in intracellular ROS and the capacity of potentiating M1 polarization in macrophages. …”

Data Sheet 3_Integrated promoter-capture Hi-C and Hi-C analysis reveals fine-tuned regulation of the 3D chromatin architecture in colorectal cancer.pdf by Ajay Kumar Saw (18201181)

“…This study integrates PCHi-C and Hi-C datasets from colorectal cancer (CRC) models investigate chromosomal interaction dynamics across various regulatory levels, from cis-regulatory elements to topologically associated domains (TADs). …”

Data Sheet 4_Integrated promoter-capture Hi-C and Hi-C analysis reveals fine-tuned regulation of the 3D chromatin architecture in colorectal cancer.pdf by Ajay Kumar Saw (18201181)

“…This study integrates PCHi-C and Hi-C datasets from colorectal cancer (CRC) models investigate chromosomal interaction dynamics across various regulatory levels, from cis-regulatory elements to topologically associated domains (TADs). …”

Data_Sheet_1_CircAMOTL1 Promotes Tumorigenesis Through miR-526b/SIK2 Axis in Cervical Cancer.docx by Zhengwei Sun (9724742)

“…</p>Methods<p>The relative expression levels of circAMOTL1 and miR-526b in cervical carcinoma patients’ specimens and cervical carcinoma cell lines were detected by RT-qPCR. …”

Table_1_Discrepancies in ICD-9/ICD-10-based codes used to identify three common diseases in cancer patients in real-world settings and their implications for disease classification... by Nora Tu (9166223)

“…Researchers should use standardized, validated coding algorithms when available to increase consistency in research and reduce risk of misclassification, which can significantly alter the findings of a study.…”

CueR regulates the expression of H2-T6SS directly and is required for H2-T6SS-mediated antibacterial activity. by Yuying Han (8067419)

“…<p><b>(A)</b> Deletion of <i>cueR</i> increases the levels Hcp2 (upper) and TssA2 (down) relative to wild-type PAO1. …”

DataSheet1_Spatial immune landscapes of SARS-CoV-2 gastrointestinal infection: macrophages contribute to local tissue inflammation and gastrointestinal symptoms.docx by Shi-Ping Xian (19178734)

“…These alterations included an increase in the levels of CD68⁺ macrophages and CD3⁺CD4⁺ T-cells, which was more pronounced in tissues with nucleocapsid protein (NP). …”

Image_2_Ankk1 Loss of Function Disrupts Dopaminergic Pathways in Zebrafish.pdf by Adele Leggieri (12056999)

“…We found that ankk1 transcript levels were significantly lower in ankk1 mutant (ankk1^27ins) fish compared to their wild type (ankk1^+/+) siblings. …”

Table4_Cloning and expression characterization of elongation of very long-chain fatty acids protein 6 (elovl6) with dietary fatty acids, ambient salinity and starvation stress in S... by Zhideng Lin (11597253)

“…In addition, studies found that replacing fish oil with soybean oil could significantly increase the transcriptional levels of three elovl6 in hepatopancreas of S. paramamosain, and the expression of elovl6a and elovl6c in hepatopancreas were more sensitive to dietary fatty acids than the elovl6b. …”

Data_Sheet_1_Type 2 Innate Lymphoid Cells Accumulate in the Brain After Hypoxia-Ischemia but Do Not Contribute to the Development of Preterm Brain Injury.pdf by Aura Zelco (4975565)

“…The inflammatory response in the injured brain was assessed using immunoassays and immunochemistry staining.</p>Results<p>Significant increases in ILCs and ILC2s were observed at 24 h, 3 days, and 7 days post-HI in the injured brain hemisphere compared with the uninjured hemisphere in wild-type mice. …”

DataSheet_1_Exploring the pathogenesis and immune infiltration in dilated cardiomyopathy complicated with atrial fibrillation by bioinformatics analysis.docx by Ting Gan (397033)

“…Background<p>Atrial fibrillation (AF) is a serious complication of dilated cardiomyopathy (DCM), which increases the risk of thromboembolic events and sudden death in DCM patients. …”

Subcellular localization and luciferase reporter assays of AOS Rbpj variants. by Ellen K. Gagliani (11478756)

“…</b> Luciferase reporter assays using different levels of WT Rbpj expression. HeLa^RBPJ-KO cells were co-transfected with the Notch/RBPJ dependent reporter 12xCSL-RE-Luc (250 ng), without or with NICD (10 ng), and Rbpj (5, 10, 50, 100, 200, 300 ng). …”

Table3_Cloning and expression characterization of elongation of very long-chain fatty acids protein 6 (elovl6) with dietary fatty acids, ambient salinity and starvation stress in S... by Zhideng Lin (11597253)

“…In addition, studies found that replacing fish oil with soybean oil could significantly increase the transcriptional levels of three elovl6 in hepatopancreas of S. paramamosain, and the expression of elovl6a and elovl6c in hepatopancreas were more sensitive to dietary fatty acids than the elovl6b. …”

Table1_Sox, Fox, and Lmx1b binding sites differentially regulate a Gdf5-Associated regulatory region during elbow development.docx by Ruth-Love Yeboah (16517268)

“…Within the GARR CRM, mutation of two binding sites common to Fox and Sox transcripstion factors reduced enhancer activity to background levels in micromass cultures and in ovo embryonic chicken wing bioassays, whereas mutation of two Sox-only binding sites caused a significant increase in activity. …”

Data Sheet 1_Case Report: Robust and durable response to the combination of tislelizumab and chemotherapy in advanced thymic epithelial tumors: a case series.pdf by Lantian Zhang (11718254)

“…The emergence of immunotherapy, particularly programmed cell death-1 (PD-1) and programmed death ligand-1 inhibitors (PD-L1), is increasingly being regarded as a promising new treatment option for various malignancies.…”

Image1_Co-occurring autism, ADHD, and gender dysphoria in children, adolescents, and young adults with eating disorders: an examination of pre- vs. post-COVID pandemic outbreak tre... by Tashalee R. Brown (19451968)

“…</p>Discussion<p>Rates of autism, ADHD, and GD are significantly higher in individuals with ED in the post-pandemic 2020-2022 cohort in comparison to the pre-pandemic 2017-2019 cohort, even after controlling for baseline levels of co-occurring psychiatric diagnoses. …”

Table4_Cloning and expression characterization of elongation of very long-chain fatty acids protein 6 (elovl6) with dietary fatty acids, ambient salinity and starvation stress in S... by Zhideng Lin (11597253)

“…In addition, studies found that replacing fish oil with soybean oil could significantly increase the transcriptional levels of three elovl6 in hepatopancreas of S. paramamosain, and the expression of elovl6a and elovl6c in hepatopancreas were more sensitive to dietary fatty acids than the elovl6b. …”

Table4_Compatibility of Diatom Valve Records With Sedimentary Ancient DNA Amplicon Data: A Case Study in a Brackish, Alkaline Tibetan Lake.XLSX by Sten Anslan (8288664)

“…Nevertheless, significant drivers for the diatom richness and community structure largely corresponded between data sets. …”

Table3_Compatibility of Diatom Valve Records With Sedimentary Ancient DNA Amplicon Data: A Case Study in a Brackish, Alkaline Tibetan Lake.xlsx by Sten Anslan (8288664)

“…Nevertheless, significant drivers for the diatom richness and community structure largely corresponded between data sets. …”