<i>rfbV</i> gene triplication in S. Paratyphi A increases VL O-ag production and reduces C3b deposition. حسب Fermin E. Guerra (6084545)

Neutrophil Superoxide anion production, Heat map for gene expression from neutrophils of CGD patients, and PCA plot for genome-wide gene expression. حسب Daniel R. Ambruso (12042605)

"…The cells are colored according to expression level relative to row (i.e., relative within gene). Genes that responded to IFN-γ with increased expression are at the bottom and those with decreased expression are at the top. …"

Patient demographics. حسب Katrine Carlsen (5477300)

"…</p><p>Results</p><p>From 25 patients (median age 14.4 years) diagnosed with Crohn´s Disease (n = 16) or ulcerative colitis (n = 9), microbiota were analysed in 671 faecal samples collected across 15 treatment intervals.</p><p>A significant decrease over time in Shannon diversity, following the initial increase within four weeks of treatment, was found across patients. …"

Alpha diversity measures across all 727 samples. حسب Katrine Carlsen (5477300)

"…</p><p>Results</p><p>From 25 patients (median age 14.4 years) diagnosed with Crohn´s Disease (n = 16) or ulcerative colitis (n = 9), microbiota were analysed in 671 faecal samples collected across 15 treatment intervals.</p><p>A significant decrease over time in Shannon diversity, following the initial increase within four weeks of treatment, was found across patients. …"

STORMS microbiome reporting checklist. حسب Katrine Carlsen (5477300)

"…</p><p>Results</p><p>From 25 patients (median age 14.4 years) diagnosed with Crohn´s Disease (n = 16) or ulcerative colitis (n = 9), microbiota were analysed in 671 faecal samples collected across 15 treatment intervals.</p><p>A significant decrease over time in Shannon diversity, following the initial increase within four weeks of treatment, was found across patients. …"

Sphingolipid biosynthetic pathway. حسب Hala Tamim El Jarkass (16625309)

Restoration of <i>S</i>. Paratyphi A L O-ag reduces VL O-ag production and impacts IgM binding. حسب Fermin E. Guerra (6084545)

Effect of O-ag modifying glycosyltransferases on complement activation and <i>Salmonella</i> interactions with human serum. حسب Fermin E. Guerra (6084545)

O-ag length and composition impacts complement activation by <i>Salmonella</i> nontyphoidal and enteric fever serovars. حسب Fermin E. Guerra (6084545)

<i>S</i>. Paratyphi A has deficient L O-ag production due to R98C mutation in WzzB. حسب Fermin E. Guerra (6084545)

Reduction of L O-ag production and antigenic shift to O2-antigen in حسب Fermin E. Guerra (6084545)

The contribution of O-ag length and the Vi capsule to serum resistance is serovar dependent. حسب Fermin E. Guerra (6084545)

Primer sequences for RT-qPCR. حسب Wenlong Shen (9313937)

"…Data from TCGA showed that NCOA4 shows greater downgrade in tumor tissues than in non-tumor tissues and the overall survival (OS) of patients with low NCOA4 expression was significantly shorter than that of patients with high NCOA4 expression.The qPCR results showed that NCOA4 was expressed at low levels in cholangiocarcinoma tissue specimens; the mRNA expression of NCOA4 decreased after knocking down NCOA4 in cells. …"

siRNA sequences and negative controls sequences. حسب Wenlong Shen (9313937)

"…Data from TCGA showed that NCOA4 shows greater downgrade in tumor tissues than in non-tumor tissues and the overall survival (OS) of patients with low NCOA4 expression was significantly shorter than that of patients with high NCOA4 expression.The qPCR results showed that NCOA4 was expressed at low levels in cholangiocarcinoma tissue specimens; the mRNA expression of NCOA4 decreased after knocking down NCOA4 in cells. …"

Antibodies used in the study. حسب Wenlong Shen (9313937)

"…Data from TCGA showed that NCOA4 shows greater downgrade in tumor tissues than in non-tumor tissues and the overall survival (OS) of patients with low NCOA4 expression was significantly shorter than that of patients with high NCOA4 expression.The qPCR results showed that NCOA4 was expressed at low levels in cholangiocarcinoma tissue specimens; the mRNA expression of NCOA4 decreased after knocking down NCOA4 in cells. …"

Analysis of host and interferon-induced responses in glucose/galactose infected with vaccinia virus. حسب Tyron Chang (9922533)

qPCR of vaccinia virus RNAs <i>IRF1</i> KO cells: glucose with and without IFN-γ priming. حسب Tyron Chang (9922533)

Glucose/galactose with extended interferon-priming does not impact levels of ISG RNAs or non-ISG proteins levels. حسب Tyron Chang (9922533)

Time course of IRF1 and IFITM3 RNA and protein expression across conditions. حسب Tyron Chang (9922533)

Vaccinia virus infection (MOI = 3) of A549 cells in media supplemented with glucose/galactose. حسب Tyron Chang (9922533)