S1 Data - by Hao Deng (409186)

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The computed weighted sum of type I (dark gray) and type II (light gray) errors ( by Farrokh Habibzadeh (12256529)

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The computed weighted sum of type I (dark gray) and type II (light gray) errors ( by Farrokh Habibzadeh (12256529)

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Relative frequency of type I (dark gray) and type II (light gray) errors in 10 000 replicas for each initial condition of the simulation. by Farrokh Habibzadeh (12256529)

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PVS_ratio changes, ΔPVS_ratio, for different radiation doses within each treatment period: 0M–3M(a), 3M–12M(b), and 12M–FollowUp(c). by Ruitian Song (11045127)

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Predicted probability of infection symptoms due to forest cover for 2011 and 2016. by Amit Timilsina (15203538)

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Patient demographic information at four time points. by Ruitian Song (11045127)

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T1w images (top row) and segmented PVS overlaid on T1w images (bottom row) at TP of 0M, 3M, 12M, and FollowUp for a typical patient. by Ruitian Song (11045127)

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Box plots representing comparisons of PVS volumes across different variables with statistical comparison annotations for TP(a), DOSE(b), Shunt(c), Anesthesia(d), and Sex(e). by Ruitian Song (11045127)

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PVS ratio comparisons across different variables using box plots with statistical comparison annotations for TP(a), DOSE(b), Shunt(c), Anesthesia(d), and Sex(e). by Ruitian Song (11045127)

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PVS_volume changes, ΔPVS_volumes, for various radiation doses within each treatment period: 0M–3M(a), 3M–12M(b), and 12M–FollowUp(c). by Ruitian Song (11045127)

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The computed weighted sum of type I (dark gray) and type II (light gray) errors ( by Farrokh Habibzadeh (12256529)

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The dataset for the paired model. by Ruitian Song (11045127)

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Patient enrollment and inclusion information. by Ruitian Song (11045127)

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Study variables. by Amit Timilsina (15203538)

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Changes of PVS ratios and volumes for different treatment periods and different dose levels (HD: high dose, SD: standard dose, and RD: reduced dose). by Ruitian Song (11045127)

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Descriptive statistics. by Amit Timilsina (15203538)

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The dataset for the full model analysis. by Ruitian Song (11045127)

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Pseudocode of the simulation program (see Supplementary Materials for <i>R</i> codes S1 File). by Farrokh Habibzadeh (12256529)

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Significant cholesterol genes arranged by day. by Katherine M. Peterson (19746455)

“…Genes with increased expression are blue; genes with decreased expression are orange; the depth of color reflects the magnitude of the increase or decrease. …”