Flow chart of study design. by Atchara Dawangpa (16560735)

“…The genes were linked to biological processes, such as cellular metabolism, with significant pathway enrichment related to oxidative phosphorylation and chemical carcinogenesis. …”

Identification of lipids with differential abundance between uninfected and BmNPV-infected head samples. by Min Feng (141118)

“…Lipids with statistically significant increase or decrease in abundance are colored in red or green, respectively. …”

Original values used to build graphs. by Min Qin (123347)

“…Joint analysis of RNA-seq and m⁶A-seq data was utilized for enriching differentially expressed genes (DEGs) with significantly altered m⁶A modifications. …”

Genetic alterations of CD70 in DLBCL. by Kang Liu (423471)

“…Compared with DLBCL patients with CD70 mutation, methylation levels of PKHD1, MAS1, and FIP1L1 were obviously increased, whereas RPL10A, MARCH10, FAM45A, and FAM45B were significantly decreased in DLBCL patients with CD70 mutation. …”

Statistical table of differential metabolites. by Wanyan Li (9741989)

“…PAMK was administered to goslings following LPS-induced intestinal injury, and its effects were assessed. PAMK significantly reduced the serum levels of inflammatory factors including interleukin (IL)-6 and C-reactive protein and decreased the expression of pro-inflammatory cytokines including interleukin(IL)-1, IL-6, and toll-like receptor 2 in jejunal tissues. …”

The metabolic differences between P-LPS and LPS. by Wanyan Li (9741989)

“…PAMK was administered to goslings following LPS-induced intestinal injury, and its effects were assessed. PAMK significantly reduced the serum levels of inflammatory factors including interleukin (IL)-6 and C-reactive protein and decreased the expression of pro-inflammatory cytokines including interleukin(IL)-1, IL-6, and toll-like receptor 2 in jejunal tissues. …”

Primer sequence. by Wanyan Li (9741989)

“…PAMK was administered to goslings following LPS-induced intestinal injury, and its effects were assessed. PAMK significantly reduced the serum levels of inflammatory factors including interleukin (IL)-6 and C-reactive protein and decreased the expression of pro-inflammatory cytokines including interleukin(IL)-1, IL-6, and toll-like receptor 2 in jejunal tissues. …”

Differentially used transcripts (DUT) for T1R and LEP groups suggest dysregulation of inflammatory circuitry in T1R. by Wilian Correa-Macedo (11813183)

“…Next, DUT with non-significant changes were assigned PΔ = 0. Given that no gene ontology (GO) or pathway enrichments were found, we searched the annotated function of each implicated gene in the GO, Reactome and KEGG databases. …”

Differences in pTSS profiles between pre- and full-term pregnancies. by Zhiwei Guo (335819)

MDSC inhibition was correlated with Trp metabolism in 17ZR101-infected lungs. by Qi Xu (134661)

“…(f) Volcano plot analysis of the significantly increased or decreased metabolites. n=6/group. …”

General metabolic profile of planktonic cells and sessile cells of <i>Salmonella</i> Enteritidis. by Yuliany Guillín (20614081)

“…Data are displayed by nonaplicate as a colored map reflecting the relative abundances of each metabolite identified as characteristic for the groups of samples (red area indicates an increase in metabolite abundance, and blue area a decrease). (B) Enrichment analysis of metabolic pathways based on significantly different metabolites.…”

Heart looping variations in <i>Notch3</i> and <i>Nodal</i> compound mutants. by Tobias Holm Bønnelykke (20968460)

Protocol for our RNA-seq. by Sabih Rashid (5618807)

“…<b>C)</b> and <b>D)</b> Bubble plots depicting most enriched GO terms in <i>aak(0)</i> animals compared to <i>daf-2</i> controls (C), and <i>hzl-1(0); aak(0)</i> compared to <i>aak(0)</i> (D), ranked by significance based on p-value. …”

Transcriptomic analysis of AMPK and HZL-1 mutants reveals widespread gene expression differences predominantly in the germ line. by Sabih Rashid (5618807)

“…<p><b>A)</b> and <b>B)</b> Bubble plots depicting most enriched GO terms in <i><i>daf-2</i></i>, <i><i>daf-2, aak(0)</i>,</i> and <i><i>aak(0); hzl-1</i></i> transcriptomes, ranked by significance based on p-value. …”

<i>DANCR</i> is a clinically important MITF and c-MYC regulated lncRNA in human melanoma. by Stephanie M. E. Jones (12883691)

Biochemical data. by Abdallah Tageldein Mansour (21158819)

“…The colitic group showed a significant increase (P < 0.05) in C-reactive protein (CRP) and myeloperoxidase (MPO) and nitric oxide (NO) (35.60, 163.30 and 280 nmol/g tissue respectively) and higher expression (P < 0.05) <i>IL-17</i>, <i>TNF-α</i>, and <i>IL-1β</i> (increased up to 2.99, 4.36 and 4.90 respectively unlike PPE-NPsIII that recorded reduced levels of CRP, MPO and NO (8,96, 78.30 and 123 nmol/g tissue respectively) and much lower (P < 0.05) levels of IL-17, TNF-α, and IL-1β expression (decreased to 1.23, 1.69 and 1.64, respectively). …”

Scoring of Disease Activity Index (DAI). by Abdallah Tageldein Mansour (21158819)

“…The colitic group showed a significant increase (P < 0.05) in C-reactive protein (CRP) and myeloperoxidase (MPO) and nitric oxide (NO) (35.60, 163.30 and 280 nmol/g tissue respectively) and higher expression (P < 0.05) <i>IL-17</i>, <i>TNF-α</i>, and <i>IL-1β</i> (increased up to 2.99, 4.36 and 4.90 respectively unlike PPE-NPsIII that recorded reduced levels of CRP, MPO and NO (8,96, 78.30 and 123 nmol/g tissue respectively) and much lower (P < 0.05) levels of IL-17, TNF-α, and IL-1β expression (decreased to 1.23, 1.69 and 1.64, respectively). …”

Primers sequences used in this study. by Abdallah Tageldein Mansour (21158819)

“…The colitic group showed a significant increase (P < 0.05) in C-reactive protein (CRP) and myeloperoxidase (MPO) and nitric oxide (NO) (35.60, 163.30 and 280 nmol/g tissue respectively) and higher expression (P < 0.05) <i>IL-17</i>, <i>TNF-α</i>, and <i>IL-1β</i> (increased up to 2.99, 4.36 and 4.90 respectively unlike PPE-NPsIII that recorded reduced levels of CRP, MPO and NO (8,96, 78.30 and 123 nmol/g tissue respectively) and much lower (P < 0.05) levels of IL-17, TNF-α, and IL-1β expression (decreased to 1.23, 1.69 and 1.64, respectively). …”

Numerical data underlying the graphs. by Stephanie M. E. Jones (12883691)

“…MITF and c-MYC, key melanoma transcription factors, regulate human <i>DANCR</i> expression and melanoma patients with high <i>DANCR</i> display significantly decreased survival. <i>DANCR</i> is a melanoma oncogene that controls cancer-associated gene expression networks to promote human melanoma cell proliferation and migration. …”

Sequence of oligonucleotides used in this study. by Stephanie M. E. Jones (12883691)

“…MITF and c-MYC, key melanoma transcription factors, regulate human <i>DANCR</i> expression and melanoma patients with high <i>DANCR</i> display significantly decreased survival. <i>DANCR</i> is a melanoma oncogene that controls cancer-associated gene expression networks to promote human melanoma cell proliferation and migration. …”