Positional candidate genotype-dependent DEGs that mapped to ChrX.3 interval. by Bristy Sabikunnahar (11545324)

Individual tumor type’s top 25 genes with the most significantly higher or lower expression. by Lydia Lam (13783306)

“…All DEGs were identified using a minimum significance of padj < .05 and a fold change of greater than 2. …”

Data_Sheet_1_Discovering a novel glycosyltransferase gene CmUGT1 enhances main metabolites production of Cordyceps militaris.docx by Rong-an He (19925664)

Gene expression changes of brain organoids 48 hours post-irradiation. by Foluwasomi A. Oyefeso (15999113)

Differential gene GO enrichment analysis. by Jing Li (10611)

“…The results obtained were as follows: (1) Short-term low concentration of Cd stress (20 mg/kg) had a transient promotion effect on the growth of sisal roots, but Cd showed a significant inhibitory effect on the growth of sisal roots over time. (2) Under different concentrations of Cd stress, the Cd content in sisal root was greater than that in sisal leaf, and Cd accumulated mainly in sisal roots. (3) With the increase of Cd stress concentration, the antioxidant enzyme catalase activity increased, peroxidase activity showed a decreasing trend, and superoxide dismutase showed a trend of increasing and then decreasing. (4) Transcriptome sequencing analysis detected 123 differentially expressed genes (DEGs), among which 85 genes were up-regulated and 38 genes were down-regulated. …”

RNA sequencing results. by Jing Li (10611)

“…The results obtained were as follows: (1) Short-term low concentration of Cd stress (20 mg/kg) had a transient promotion effect on the growth of sisal roots, but Cd showed a significant inhibitory effect on the growth of sisal roots over time. (2) Under different concentrations of Cd stress, the Cd content in sisal root was greater than that in sisal leaf, and Cd accumulated mainly in sisal roots. (3) With the increase of Cd stress concentration, the antioxidant enzyme catalase activity increased, peroxidase activity showed a decreasing trend, and superoxide dismutase showed a trend of increasing and then decreasing. (4) Transcriptome sequencing analysis detected 123 differentially expressed genes (DEGs), among which 85 genes were up-regulated and 38 genes were down-regulated. …”

Table3_Physiological characteristics and transcriptomic analyses of alfalfa root crown in wintering.docx by Xiaolong Wang (20235)

“…Among them, 463 DEGs showed an increase in expression, whereas 415 DEGs showed a decrease in expression. …”

Table1_Physiological characteristics and transcriptomic analyses of alfalfa root crown in wintering.docx by Xiaolong Wang (20235)

“…Among them, 463 DEGs showed an increase in expression, whereas 415 DEGs showed a decrease in expression. …”

Table2_Physiological characteristics and transcriptomic analyses of alfalfa root crown in wintering.docx by Xiaolong Wang (20235)

“…Among them, 463 DEGs showed an increase in expression, whereas 415 DEGs showed a decrease in expression. …”

Image_1_JMJD6 orchestrates a transcriptional program in favor of endocrine resistance in ER+ breast cancer cells.tif by Partha Das (659095)

“…Indeed, JOE cells showed a significant decrease in both ESR1 and ER levels and JMJD6 siRNA transfection increased the expression of both. …”

Image_3_JMJD6 orchestrates a transcriptional program in favor of endocrine resistance in ER+ breast cancer cells.tif by Partha Das (659095)

“…Indeed, JOE cells showed a significant decrease in both ESR1 and ER levels and JMJD6 siRNA transfection increased the expression of both. …”

Table_1_JMJD6 orchestrates a transcriptional program in favor of endocrine resistance in ER+ breast cancer cells.xlsx by Partha Das (659095)

“…Indeed, JOE cells showed a significant decrease in both ESR1 and ER levels and JMJD6 siRNA transfection increased the expression of both. …”

Image_4_JMJD6 orchestrates a transcriptional program in favor of endocrine resistance in ER+ breast cancer cells.tif by Partha Das (659095)

“…Indeed, JOE cells showed a significant decrease in both ESR1 and ER levels and JMJD6 siRNA transfection increased the expression of both. …”

Table_2_JMJD6 orchestrates a transcriptional program in favor of endocrine resistance in ER+ breast cancer cells.xlsx by Partha Das (659095)

“…Indeed, JOE cells showed a significant decrease in both ESR1 and ER levels and JMJD6 siRNA transfection increased the expression of both. …”

Image_2_JMJD6 orchestrates a transcriptional program in favor of endocrine resistance in ER+ breast cancer cells.tif by Partha Das (659095)

“…Indeed, JOE cells showed a significant decrease in both ESR1 and ER levels and JMJD6 siRNA transfection increased the expression of both. …”

Table_3_JMJD6 orchestrates a transcriptional program in favor of endocrine resistance in ER+ breast cancer cells.xlsx by Partha Das (659095)

“…Indeed, JOE cells showed a significant decrease in both ESR1 and ER levels and JMJD6 siRNA transfection increased the expression of both. …”

Loss of H2A.Z from transcription start sites was correlated with, but not required for, HU-induced gene activation. by Hilary T. Brewis (11798006)

“…There was overlap found in all four groups: 1) genes that had increased mRNA expression and H2A.Z enrichment at their TSS in the HU-treated condition, 2) mRNA expression increased, while H2A.Z enrichment decreased, 3) mRNA expression decreased, while H2A.Z enrichment increased, and 4) genes where mRNA expression and H2A.Z enrichment at the TSS decreased after HU exposure. …”

Data_Sheet_1_Genome-Wide Profiling of DNA Methylome and Transcriptome Reveals Epigenetic Regulation of Potato Response to DON Stress.PDF by Yan Shi (166398)

“…<p>Potato is an important food crop that occupies lesser area but has greater production than rice and wheat. However, potato production is affected by numerous biotic and abiotic stresses, among which Fusarium dry rot is a disease that has significant effect on potato production, storage, and processing. …”

Data_Sheet_2_Genome-Wide Profiling of DNA Methylome and Transcriptome Reveals Epigenetic Regulation of Potato Response to DON Stress.xlsx by Yan Shi (166398)

“…<p>Potato is an important food crop that occupies lesser area but has greater production than rice and wheat. However, potato production is affected by numerous biotic and abiotic stresses, among which Fusarium dry rot is a disease that has significant effect on potato production, storage, and processing. …”

Table3_Multi-omics analysis provides insights into the mechanism underlying fruit color formation in Capsicum.docx by Zhao Song (7135202)

“…Paraffin section assay revealed that the epidermal cells of immature CSJ010 fruits exhibited a more compact arrangement with significantly greater length than those of CSJ009. …”