Heatmap. by Guolian Wu (21464168)

“…Protein-protein interaction (PPI) network was constructed, and five candidate hub genes (<i>AURKB, BUB1, CCL2, IL-4</i>, and <i>TOP2A)</i> were identified. Immune cell infiltration analysis gusing the XCell algorithm showed increased levels of Monocytes, neutrophils, and other immune cells in KD, while B cells and T cells were decreased. …”

Figure 2. by Guolian Wu (21464168)

“…Protein-protein interaction (PPI) network was constructed, and five candidate hub genes (<i>AURKB, BUB1, CCL2, IL-4</i>, and <i>TOP2A)</i> were identified. Immune cell infiltration analysis gusing the XCell algorithm showed increased levels of Monocytes, neutrophils, and other immune cells in KD, while B cells and T cells were decreased. …”

KEGG Enrichment Analysis. by Guolian Wu (21464168)

“…Protein-protein interaction (PPI) network was constructed, and five candidate hub genes (<i>AURKB, BUB1, CCL2, IL-4</i>, and <i>TOP2A)</i> were identified. Immune cell infiltration analysis gusing the XCell algorithm showed increased levels of Monocytes, neutrophils, and other immune cells in KD, while B cells and T cells were decreased. …”

Figure 1. by Guolian Wu (21464168)

“…Protein-protein interaction (PPI) network was constructed, and five candidate hub genes (<i>AURKB, BUB1, CCL2, IL-4</i>, and <i>TOP2A)</i> were identified. Immune cell infiltration analysis gusing the XCell algorithm showed increased levels of Monocytes, neutrophils, and other immune cells in KD, while B cells and T cells were decreased. …”

Gene Name to ID Conversion. by Guolian Wu (21464168)

“…Protein-protein interaction (PPI) network was constructed, and five candidate hub genes (<i>AURKB, BUB1, CCL2, IL-4</i>, and <i>TOP2A)</i> were identified. Immune cell infiltration analysis gusing the XCell algorithm showed increased levels of Monocytes, neutrophils, and other immune cells in KD, while B cells and T cells were decreased. …”

Bar Chart. by Guolian Wu (21464168)

“…Protein-protein interaction (PPI) network was constructed, and five candidate hub genes (<i>AURKB, BUB1, CCL2, IL-4</i>, and <i>TOP2A)</i> were identified. Immune cell infiltration analysis gusing the XCell algorithm showed increased levels of Monocytes, neutrophils, and other immune cells in KD, while B cells and T cells were decreased. …”

Filter Samples with p < 0.05. by Guolian Wu (21464168)

“…Protein-protein interaction (PPI) network was constructed, and five candidate hub genes (<i>AURKB, BUB1, CCL2, IL-4</i>, and <i>TOP2A)</i> were identified. Immune cell infiltration analysis gusing the XCell algorithm showed increased levels of Monocytes, neutrophils, and other immune cells in KD, while B cells and T cells were decreased. …”

KEGG Diagram. by Guolian Wu (21464168)

“…Protein-protein interaction (PPI) network was constructed, and five candidate hub genes (<i>AURKB, BUB1, CCL2, IL-4</i>, and <i>TOP2A)</i> were identified. Immune cell infiltration analysis gusing the XCell algorithm showed increased levels of Monocytes, neutrophils, and other immune cells in KD, while B cells and T cells were decreased. …”

Grouping and Sorting. by Guolian Wu (21464168)

“…Protein-protein interaction (PPI) network was constructed, and five candidate hub genes (<i>AURKB, BUB1, CCL2, IL-4</i>, and <i>TOP2A)</i> were identified. Immune cell infiltration analysis gusing the XCell algorithm showed increased levels of Monocytes, neutrophils, and other immune cells in KD, while B cells and T cells were decreased. …”

Violin Plot. by Guolian Wu (21464168)

“…Protein-protein interaction (PPI) network was constructed, and five candidate hub genes (<i>AURKB, BUB1, CCL2, IL-4</i>, and <i>TOP2A)</i> were identified. Immune cell infiltration analysis gusing the XCell algorithm showed increased levels of Monocytes, neutrophils, and other immune cells in KD, while B cells and T cells were decreased. …”

XCell Algorithm for Immune Cell Matrix. by Guolian Wu (21464168)

“…Protein-protein interaction (PPI) network was constructed, and five candidate hub genes (<i>AURKB, BUB1, CCL2, IL-4</i>, and <i>TOP2A)</i> were identified. Immune cell infiltration analysis gusing the XCell algorithm showed increased levels of Monocytes, neutrophils, and other immune cells in KD, while B cells and T cells were decreased. …”

List of HipSci cell lines used in the study. by Sara Cuvertino (18892069)

“…In contrast with the epigenomic changes, the number of DEGs decrease as differentiation progresses. Our analysis reveals significant enrichment of differentially downregulated genes in areas containing putative enhancer regions with H3K4me1 loss. …”

Isolation and characterization of the <i>clr4–1</i> mutant strain. by Ziyue Liu (381532)

“…(D) Venn diagrams show differentially expressed genes (DEGs) (left: > 2-fold increased expression; right: < 0.5-fold decreased expression) in <i>pab2∆</i> and <i>clr4–1</i> cells. …”

Characterization of <i>S. japonicus pab</i>2Δ. by Ziyue Liu (381532)

“…The left diagram shows genes with > 2-fold increased expression, and the right diagram shows genes with < 0.5-fold decreased expression. …”

Transcriptomic data of mature adipocytes from Dbc1 KO vs WT mice by Leonardo Santos (477304)

“…<b>(C)</b> Reactome-enriched pathways identified for upregulated DEGs. <b>(D)</b> Emapplot of the top 50 significantly enriched Gene Ontology terms (Biological Process), with increased terms in red and decreased terms in blue, in Dbc1 KO compared to Dbc1^LoxP/LoxP. …”

Supplementary Material for: Clinical and Experimental Insights into the Role of NETosis in IgA Nephropathy Pathogenesis by figshare admin karger (2628495)

“…Serum levels of NETosis markers—citrullinated histone H3 (CitH3), myeloperoxidase (MPO), and neutrophil elastase (NE)—were elevated in IgAN patients, with CitH3 levels correlating with Gd-IgA1. Inhibiting NETosis with GSK484 reduced CitH3 levels in IgAN mice and improved clinical outcomes, including decreased proteinuria and increased serum albumin. …”

Table 1_OSH45, a homeobox transcription factor, coordinates low-phosphate adaptation in rice.xlsx by Hong Lu (58784)

“…Subcellular localization assays indicated that OSH45 is a nuclear localized protein. OSH45 overexpression transgenic plants exhibited enhanced low-Pi tolerance, characterized by significantly higher Pi concentrations and increased shoot and root biomass compared to wild type (WT) under Pi-limited conditions. …”

Table 2_OSH45, a homeobox transcription factor, coordinates low-phosphate adaptation in rice.xlsx by Hong Lu (58784)

“…Subcellular localization assays indicated that OSH45 is a nuclear localized protein. OSH45 overexpression transgenic plants exhibited enhanced low-Pi tolerance, characterized by significantly higher Pi concentrations and increased shoot and root biomass compared to wild type (WT) under Pi-limited conditions. …”

Table 3_OSH45, a homeobox transcription factor, coordinates low-phosphate adaptation in rice.xlsx by Hong Lu (58784)

“…Subcellular localization assays indicated that OSH45 is a nuclear localized protein. OSH45 overexpression transgenic plants exhibited enhanced low-Pi tolerance, characterized by significantly higher Pi concentrations and increased shoot and root biomass compared to wild type (WT) under Pi-limited conditions. …”

Table 4_OSH45, a homeobox transcription factor, coordinates low-phosphate adaptation in rice.xlsx by Hong Lu (58784)

“…Subcellular localization assays indicated that OSH45 is a nuclear localized protein. OSH45 overexpression transgenic plants exhibited enhanced low-Pi tolerance, characterized by significantly higher Pi concentrations and increased shoot and root biomass compared to wild type (WT) under Pi-limited conditions. …”