FLEXI interactions with RNA-binding proteins. by Jun Yao (9646)

“…RNA-binding sites: I, within introns corresponding to FLEXIs; SS-I and SS-E, bimodally enriched across the 5’- and 3’ splice sites in unspliced pre-mRNAs with the midpoints in the intron or flanking exon (SS-I and SS-E, respectively; Figs <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1011416#pgen.1011416.g004" target="_blank">4A</a> and <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1011416#pgen.1011416.s011" target="_blank">S11</a>). mRNA levels, RBPs whose knockdown resulted in significant difference in mRNA levels (increased or decreased, DESeq2 |LFC|≥1, adjusted p≤0.05) from host gene of FLEXIs with a binding site for that RBP compared to those genes whose transcripts lacked a binding site for the same RBPs based on ENCODE RBP-knockdown datasets (p≤0.05 calculated by Fisher’s exact test; <a href="http://www.plosgenetics.org/article/info:doi/10.1371/journal.pgen.1011416#pgen.1011416.s013" target="_blank">S13 Fig</a>). …”

Table 1_Integrated gut microbiota and metabolomic profiling reveals key associations between amino acid levels and gut microbial composition in patients with obesity.docx by Musen Qi (22489075)

“…In total, 28 amino acid metabolites were quantified and used for subsequent statistical analysis.</p>Results<p>Significant differences in microbial composition were observed across multiple taxonomic levels between the controls and patients with obesity. …”

SEAwise Report on the impacts of fisheries on stocks and landings under SEAwise EBFM by Dorleta Garcia (12315201)

“…The ecosystem model generally showed less optimistic outcomes under climate change, with significant decreases in biomass and catches in both the Celtic and North Seas. …”

Dopamine receptors D1, D2, and D4 modulate electrical synapses and excitability in the thalamic reticular nucleus supplementary table by Mitchell Vaughn (19871487)

“…<p dir="ltr">Table 1: All reported data on excitability, spiking, and electrical coupling of TRN neurons in control and experimental conditions from the manuscript titled: Dopamine receptors D1, D2, and D4 modulate electrical synapses and excitability in the thalamic reticular nucleus. Significant increases are highlighted green, and significant decreases are highlighted red.…”

Expression of <i>SHH</i> in the FEZ after RCAS-virus infection to induce overexpression and knockdown of <i>PBX1</i> and <i>PBX3.</i> by Chan Hee Mok (11247669)

“…Statistical significance was determined at P-value < 0.05; *, P < 0.05; **, P < 0.01; ****, P < 0.0001; ns, not significant.…”

The effect of EDF derived from <i>E</i>. <i>coli</i> (in mid-logarithmic growth phase, OD = 0.6) on the MRSA and MSSA. by Shahriar Bakhti (20391188)

“…<i>coli</i> 25922 plus sub-MIC rifampin (2 μg/ml), the CFUs were decreased over than 3 times (p<0.001). But the standard EDF alone as well as sub-MIC rifampin alone, didn’t have significant effect on the CFUs of the MRSA and MSSA strains; <b>(B)</b> The EDF derived from the clinical isolate of <i>E</i>. …”

Update on trimethylamine N-oxide (TMAO) as a piezolyte and cryoprotectant: its role in a depth limit for marine fishes and loss from hadal fish during capture by Paul Yancey (14354982)

“…<p dir="ltr"><b>I</b><b>NTRODUCTION</b></p><p dir="ltr">Trimethylamine N-oxide (TMAO) is a small organic molecule found at osmotically-significant concentrations in many marine animal taxa. …”

Data for detecting trends in hydroclimatic changes in the Svartberget Krycklan catchment by Tejshree Tiwari (12972713)

“…Looking at runoff, we have observed increasing baseflow during the winter but decreasing baseflow during the summers. Using the significant climate indices to predict the changes in runoff variability across the 40 years indicated that warmer winters increase winter baseflow but exhaust the water stored to sustain summer baseflow. …”

S1_Figure.pdf by George Brooks (21579206)

“…We observed no age-associated changes in coupling efficiency (ADP:O) of mitochondrial reticulum preparations, but respiratory control (RCR) was decreased in older mice. Additionally, older skeletal muscle exhibited subtle yet significant reductions in the expression of proteins functionally related to substrate uptake and oxidation (mMCT1, mPC1, CPT1b, HADH). …”

Image 3_Effect of chitosan on buck semen quality and semen plasma metabolites during low-temperature storage.tif by Meijun Song (11921087)

“…</p>Results<p>The results showed that when 0.2 mg/mL chitosan was added to semen dilution, sperm viability and antioxidant capacity were highest and significantly higher than the control group (p < 0.05). …”

Table 1_Effect of chitosan on buck semen quality and semen plasma metabolites during low-temperature storage.xlsx by Meijun Song (11921087)

“…</p>Results<p>The results showed that when 0.2 mg/mL chitosan was added to semen dilution, sperm viability and antioxidant capacity were highest and significantly higher than the control group (p < 0.05). …”

Image 2_Effect of chitosan on buck semen quality and semen plasma metabolites during low-temperature storage.tif by Meijun Song (11921087)

“…</p>Results<p>The results showed that when 0.2 mg/mL chitosan was added to semen dilution, sperm viability and antioxidant capacity were highest and significantly higher than the control group (p < 0.05). …”

Image 1_Effect of chitosan on buck semen quality and semen plasma metabolites during low-temperature storage.tif by Meijun Song (11921087)

“…</p>Results<p>The results showed that when 0.2 mg/mL chitosan was added to semen dilution, sperm viability and antioxidant capacity were highest and significantly higher than the control group (p < 0.05). …”

Table 3_Effect of chitosan on buck semen quality and semen plasma metabolites during low-temperature storage.xlsx by Meijun Song (11921087)

“…</p>Results<p>The results showed that when 0.2 mg/mL chitosan was added to semen dilution, sperm viability and antioxidant capacity were highest and significantly higher than the control group (p < 0.05). …”

Table 2_Effect of chitosan on buck semen quality and semen plasma metabolites during low-temperature storage.xlsx by Meijun Song (11921087)

“…</p>Results<p>The results showed that when 0.2 mg/mL chitosan was added to semen dilution, sperm viability and antioxidant capacity were highest and significantly higher than the control group (p < 0.05). …”

Complete dataset of loon productivity for Fuirst et al. by Matthew Fuirst (11236764)

“…While all regions showed long-term mean productivity rates at or above the threshold considered necessary for population stability (0.48 chicks fledged per territorial pair), we found significant declines in productivity (-0.17− -2.8% per year over 19−48 years) in seven regions, non-significant but downward trends in four others, and a non-significant increase in one region (Maine). …”

PMS repressed ferroptosis in T2DM mice. by Hongmin Zhao (20710544)

“…<p>(a,b) TUNEL staining results demonstrated that the number of cell death in the pancreas of T2DM mice was significantly decreased following PMS intervention. …”

Table 1_Comparative study of brain activity and functional connectivity in blepharospasm and blepharospasm-oromandibular dystonia.doc by Yanying Wang (1615096)

“…In addition, decreased dFC strength was found between the right pallidum and cerebellum. …”

Data Sheet 2_The relict plant Tetraena mongolica plantations increase the nutrition and microbial diversity in desert soil.docx by Yanan Quan (19732382)

“…</p>Methods<p>This study aimed to evaluate the effects of planting T. mongolica on soil nutrition and microbial communities by comparing the root zone soil (Rz_soil) and bare soil (B_soil) across three different plant communitie. </p>Results<p>The results showed that T. mongolica decreased soil pH and Na⁺ while increasing available potassium, soil organic matter, organic carbon, total nitrogen, and potassium. …”

Data Sheet 1_The relict plant Tetraena mongolica plantations increase the nutrition and microbial diversity in desert soil.docx by Yanan Quan (19732382)

“…</p>Methods<p>This study aimed to evaluate the effects of planting T. mongolica on soil nutrition and microbial communities by comparing the root zone soil (Rz_soil) and bare soil (B_soil) across three different plant communitie. </p>Results<p>The results showed that T. mongolica decreased soil pH and Na⁺ while increasing available potassium, soil organic matter, organic carbon, total nitrogen, and potassium. …”