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significant sites » significant side (Expand Search), significant size (Expand Search), significant rates (Expand Search)
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sites based » scores based (Expand Search)
significant sites » significant side (Expand Search), significant size (Expand Search), significant rates (Expand Search)
greater decrease » greater increase (Expand Search), greater increases (Expand Search), rate decreased (Expand Search)
genes decrease » sizes decrease (Expand Search), teer decrease (Expand Search), greatest decrease (Expand Search)
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a, Anti-correlation of gene expression between <i>dmdR1</i> and its predicted regulon. Left: Pearson correlation coefficients (PCCs) between <i>dmdR1</i> and all genes with a DmdR1 position weight matrix (PWM) score greater than 15 in their regulatory region. The vertical dashed line marks the refined PWM score threshold of 22.875. The horizontal dotted lines mark PCC = ±0.43, corresponding to an adjusted <i>p</i>-value of 0.05. Right: Target genes immediately downstream of a predicted DmdR1 binding site, ordered by decreasing PWM score. Plus and minus indicate the strand of the target gene. Genes marked with an × did not have significant co-expression with <i>dmdR1</i>....
Published 2025“…Plus and minus indicate the strand of the target gene. Genes marked with an × did not have significant co-expression with <i>dmdR1</i>. …”
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Opposing trends in abundance of two genera, <i>Anaerostipes</i> and <i>Escherichia-Shigella</i>.
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Comparisons of abundance (numbers of sequence reads) of some bacteria between Ss- and Ss+ group.
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Clustering using the unweighted pair group method with arithmetic mean (UPGMA).
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