Manhattan plot that shows the location of genes involved in folate, homocysteine, and transsulfuration pathways for which we observed, from hybrid analyses, a significantly decreased risk of obstructive heart defects when the risk variant was paternally-derived compared to maternally-derived, The National Birth Defects Prevention Study, USA, October 1997–August 2008 births. by Jenil Patel (10271373)

“…<p>Manhattan plot that shows the location of genes involved in folate, homocysteine, and transsulfuration pathways for which we observed, from hybrid analyses, a significantly decreased risk of obstructive heart defects when the risk variant was paternally-derived compared to maternally-derived, The National Birth Defects Prevention Study, USA, October 1997–August 2008 births.…”

Comparison of the estimated SNP-based heritability and predictive performance across the 813 traits with significant PRSs. by Yosuke Tanigawa (8805017)

SNP-based association analysis. by Xianyin Ding (12035544)

SNP-endophenotype pairs showing significant associations with both left and right eyes. by Ziqian Xie (1578703)

Observed and predicted changes for the five metabolites significantly associated with the rs603424 SNP. by Juliette Cooke (11402543)

Estimated SNP-based heritability. by Yosuke Tanigawa (8805017)

“…<p>For each trait with a significant PRS model (trait, trait_name, and trait_category), we show the types of link functions in a generalized linear model (family column, Gaussian for quantitative traits and binomial for binary traits), estimated SNP-based observed scale heritability with standard error (h2_obs and h2_obs_se), lambda GC (lambda_GC), mean chi-square statistic (mean_chi2), LD score regression intercept and its standard error (intercept and intercept_se), and the proportion of the inflation attributed to the LD score regression intercept, defined by (intercept -1)/(mean(chi-square)-1), and its standard error (ratio and ratio_se).…”

PCA biplot based on the groupwise SNP frequency matrix. by Lorena Ferreira de Oliveira Leles (6533075)

Polygenic scores based on PRS-CS and significant SNP methods using top fine-mapped independent variants by trait. by Mohanraj Krishnan (15443609)

“…<p>Polygenic scores based on PRS-CS and significant SNP methods using top fine-mapped independent variants by trait.…”

Enrichment of SNP-based heritability for test phenotypes. by Aodán Laighneach (17692183)

The Venn diagram of significant associations for the kernel traits in five years. by Longqing Sun (5185931)

Analysis of molecular variance based on SNP marker data. by Kwaku Adomako (17990427)

Predicted ranks for the metabolites present in a ratio significantly associated with the rs603424 SNP. by Juliette Cooke (11402543)

Summary of SNPs significantly associated with kernel traits across five years. by Longqing Sun (5185931)

Phylogenetic dendrogram based on SNP markers for breed relationship definition. by Anastassiya Perfilyeva (7122332)

The phylogenetic trees of the studied soybean genotypes based on the SNP markers. by Abebawork Tilahun Assfaw (22410858)

Population structure of the studied soybean genotypes based on the SNP markers. by Abebawork Tilahun Assfaw (22410858)

Principal component analysis of the chicken genotype based on SNP markers. by Kwaku Adomako (17990427)

SNPs significantly associated with 18-week body weight in turkeys detected by GWAS based on a 65K SNP Illumina panel. by Emhimad A. E. Abdalla (12225763)

“…<p>SNPs significantly associated with 18-week body weight in turkeys detected by GWAS based on a 65K SNP Illumina panel.…”

Results of Model-based Bayesian analysis for 109 inbred lines based on SNP markers. by Kuldeep Kandarkar (18018062)

The top five significant biological processes for each trait. by Hyo Jun Lee (9721560)