Data_Sheet_1_Dynamic Changes of DNA Methylation During Wild Strawberry (Fragaria nilgerrensis) Tissue Culture.xlsx by Qiang Cao (119096)

“…However, the genome wide dynamic methylation patterns of strawberry tissue culture remain unclear. In this study, we used whole-genome bisulfite sequencing (WGBS) to study genomic DNA methylation changes of a wild strawberry Fragaria nilgerrensis at six stages: from explants of shoot tips to outplanting and acclimation. …”

Table_1_Acquisition of complement fixing antibodies targeting Plasmodium falciparum merozoites in infants and their mothers in Uganda.docx by Susanne E. Mortazavi (12863876)

“…However, the process of early-life development of complement-fixing antibodies in infants, both in comparison to their respective mothers and to other immune parameters, remains less clear.</p>Results<p>We measured complement-fixing antibodies in newborns and their mothers in a malaria endemic area over 5 years follow-up and found that infants’ complement-fixing antibody levels were highest at birth, decreased until six months, then increased progressively until they were similar to birth at five years. …”

Table_1_A simple PCR-based quick detection of the economically important oriental fruit fly, Bactrocera dorsalis (Hendel) from India.docx by Varun Arya (18994001)

“…By analyzing the variations in the mitochondrial cytochrome oxidase-1 gene sequence (Insect barcoding gene), we developed a species-specific primer (SSP), DorFP1/DorRP1, for accurate identification of B. dorsalis. …”

Table_7_Bt GS57 Interaction With Gut Microbiota Accelerates Spodoptera exigua Mortality.XLS by Yazi Li (4162948)

“…Furthermore, the Bt GS57 genome contains six cry genes: cry1Ca, cry1Da, cry2Ab, cry9Ea, cry1Ia, and cry1Aa, and a vegetative insecticidal protein gene vip3Aa. …”

Proportion of parental line (A receptor and R pollinator) seeds improving rice hybrid production by Adriano Stephan Nascente (4647931)

“…By increasing the percentage of the pollinator seeds (INTA Puita CL) from 0.75 to 24% in the mixture with the receptor (line 464 A), we increased yield of INTA Puita CL grains (7 to 2676 kg ha-1) and hybrid seeds (279 to 1493 kg ha-1). …”

Data Sheet 1_Unraveling the anti-inflammatory effects of Mediterranean diet in patients with cancer remission.pdf by Michele Francesco Di Tolla (12503167)

“…Serum concentrations of cytokines, chemokines, growth factors, and metabolic markers were measured at baseline and at a six-month follow-up.</p>Results<p>Baseline analysis revealed distinct clusters linking inflammatory status, clinical variables, and metabolic profiles, confirming associations between systemic inflammation and body composition features, without clear separation among cancer types. …”

Data_Dheet_1_Endothelial Progenitor Cells Produced From Human Pluripotent Stem Cells by a Synergistic Combination of Cytokines, Small Compounds, and Serum-Free Medium.zip by Simon Farkas (8848784)

“…The experiments were performed on the human embryonic stem cell line H9 and six human induced pluripotent stem cell lines generated in our laboratory. …”

The role of IRF-1 in mediating T-cell immune imbalance in systemic lupus erythematosus and the construction of a diagnostic model by Zichen Huang (6587885)

“…The role of interferon regulatory factor-1 (IRF-1) remains unclear. We integrated single-cell transcriptomes (scRNA-seq; GSE254176), 6 bulk transcriptomic datasets (1079 SLE patients, 137 controls, GSE72326 and GSE61635 were merged as training datasets, including 256 SLE patients and 50 controls), and clinical samples (70 SLE patients and 58 controls). …”

Supplementary Material for: Evaluation of Retinal Pigment Epithelium and Choroidal Neovascularization in Rats Using Laser-Scanning Optical-Resolution Photoacoustic Microscopy by Xiao M. (7581572)

“…Six additional rats, treated with an anti-VEGF antibody or immunoglobulin G immediately after photocoagulation, were imaged 7 and 14 days after injection, and CNV lesion areas were compared. …”

DataSheet_2_CRISPR/Cas9-mediated editing of PHYTOENE DESATURASE gene in onion (Allium cepa L.).xlsx by Pawan Mainkar (16890567)

“…Total chlorophyll content was drastically reduced in albino shoots and significantly decreased in chimeric shoots. Out of the six Cas9 gene PCR-confirmed regenerated shoots, two exhibited the albino phenotype due to insertions/deletions (InDels) and substitution-based mutations in and around the AcPDS target sites. …”

Supplementary Material for: Complete response to pembrolizumab in a patient with castration-resistant prostate cancer with both BRCA positivity and a high frequency of microsatelli... by Hirano T. (2890115)

“…A cancer gene panel test was positive results for BRCA2 mutation with a MSI-high. After six courses of docetaxel, lymph node enlargement was observed and olaparib was initiated. …”

Beyond Estrogenicity: A Comparative Assessment of Bisphenol A and Its Alternatives in In Vitro Assays Questions Safety of Replacements by Vanessa Srebny (12565963)

“…This study compared BPA and 26 alternatives in six in vitro bioassays for cytotoxicity, endocrine disruption, xenobiotic metabolism, adaptive stress responses, mitochondrial toxicity, and neurotoxicity. …”

DataSheet1_Electrical Resistivity Tomography (ERT) Monitoring for Landslides: Case Study in the Lantai Area, Yilan Taiping Mountain, Northeast Taiwan.pdf by Wu-Nan Tsai (11538043)

“…Accordingly, we suggest that high-frequency time-lapse ERT monitoring could play a crucial role in landslide early warning.…”

Table_6_Bt GS57 Interaction With Gut Microbiota Accelerates Spodoptera exigua Mortality.XLS by Yazi Li (4162948)

“…Furthermore, the Bt GS57 genome contains six cry genes: cry1Ca, cry1Da, cry2Ab, cry9Ea, cry1Ia, and cry1Aa, and a vegetative insecticidal protein gene vip3Aa. …”

Table_5_Bt GS57 Interaction With Gut Microbiota Accelerates Spodoptera exigua Mortality.XLS by Yazi Li (4162948)

“…Furthermore, the Bt GS57 genome contains six cry genes: cry1Ca, cry1Da, cry2Ab, cry9Ea, cry1Ia, and cry1Aa, and a vegetative insecticidal protein gene vip3Aa. …”

Image2_Porcn is essential for growth and invagination of the mammalian optic cup.TIF by Sabine Fuhrmann (14033082)

“…However, it is unclear whether this also applies to mammals. We performed ubiquitous conditional inactivation of Porcn in mouse around the eye field stage. …”

Image_3_Long Non-coding RNAs Associated With Neurodegeneration-Linked Genes Are Reduced in Parkinson’s Disease Patients.TIF by Maximilianos Elkouris (175800)

“…Interestingly, these lncRNAs are upregulated during neuronal differentiation of SH-SY5Y cells and of dopaminergic neurons generated from human fibroblast-derived induced pluripotent stem cells. Importantly, six lncRNAs are found under-expressed in the nigra and three in the cerebellum of PD patients compared to controls. …”

Image 7_Proteome changes during in vitro culture adaptation of Toxoplasma gondii archetypal II and III field isolates.tif by Joachim Müller (265589)

“…Few reports exist on the molecular bases that govern this adaptation. Herein, we analyzed the T. gondii proteomes of different isolates at two timepoints during cell culture adaptation.…”

Data_Sheet_1_Bt GS57 Interaction With Gut Microbiota Accelerates Spodoptera exigua Mortality.doc by Yazi Li (4162948)

“…Furthermore, the Bt GS57 genome contains six cry genes: cry1Ca, cry1Da, cry2Ab, cry9Ea, cry1Ia, and cry1Aa, and a vegetative insecticidal protein gene vip3Aa. …”

Image_1_Long Non-coding RNAs Associated With Neurodegeneration-Linked Genes Are Reduced in Parkinson’s Disease Patients.TIF by Maximilianos Elkouris (175800)

“…Interestingly, these lncRNAs are upregulated during neuronal differentiation of SH-SY5Y cells and of dopaminergic neurons generated from human fibroblast-derived induced pluripotent stem cells. Importantly, six lncRNAs are found under-expressed in the nigra and three in the cerebellum of PD patients compared to controls. …”