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Data analysis Python code
Published 2024“…<p>Python code presented in Jupyter notebooks used for the analysis of the scRNA-seq data from human interneurons presented in the study "Interneuron diversity in the human dorsal striatum", doi: https://doi.org/10.1101/2023.03.22.533839.…”
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2D Orthogonal Planes Split: <b>Python</b> and <b>MATLAB</b> code | <b>Source Images</b> for Figures
Published 2025“…The output files generated by the code include results from both Python and MATLAB implementations; these output images are provided as validation, demonstrating that both implementations produce matching results.…”
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HaPy-Bug – Human Annotated Python Bug Resolution Dataset
Published 2025“…<p dir="ltr">We present HaPy-Bug, a curated dataset of 793 Python source code commits associated with bug fixes, with each line of code annotated by three domain experts. …”
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Improved resolution in fiber bundle inline holographic microscopy using multiple illumination sources : Data and Code
Published 2023“…</li><li><b>schematic :</b> Contains inkscape SVG files for system schematic figure.</li></ul><h2>Code</h2><p dir="ltr">Python code to process the raw data and generate the figures from the paper is in the <i>'code'</i> folder.…”
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Supplementary material for "Full vector inversion of magnetic microscopy images using Euler deconvolution as prior information"
Published 2024“…</p><h2>License</h2><p dir="ltr">All Python source code (including <code>.py</code> and <code>.ipynb</code> files) is made available under the MIT license. …”
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Invert4Geom; Progress towards an open-source geometric gravity inversion with stochastic uncertainty analysis
Published 2024“…SimPEG, PyGIMLi), limited software exists within the open-science community for this geometric style of gravity inversion. Here, we present an initial 3D geometric gravity inversion algorithm written in Python, which utilizes various community-led packages such as Harmonica, Verde, and Xarray. …”
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Data for "Freezing rain events related to atmospheric rivers and associated mechanisms for western North America"
Published 2019“…</div><div>The data is provided in python .pckl format. The example code for reading each of the provided .pckl files is given in Readme.txt.…”
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Analysis, Visualization, and DEM Modeling Software
Published 2020“…The other three Python scripts reproduce the figures presented in the manuscript and supporting information. …”
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