Showing 61 - 80 results of 333 for search '((python model) OR (python code)) predicted', query time: 0.23s Refine Results
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    Code by Baoqiang Chen (21099509)

    Published 2025
    “…</p><p><br></p><p dir="ltr"><b>Prediction and Design of 5′ UTRs</b></p><p dir="ltr">We developed a convolutional neural network (CNN) model to predict 5′ UTRs. …”
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    Analysis Codes for "Gene Signatures Predict Metastatic Organotropism in Breast Cancer: A Machine Learning Analysis of Single-Cell Data" by Ardo Sanjaya (18321300)

    Published 2025
    “…<p dir="ltr">This repository contains the complete set of R and Python scripts developed for the study <i>"Gene Signatures Predict Metastatic Organotropism in Breast Cancer: A Machine Learning Analysis of Single-Cell Data."…”
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    OVEP code by Yuanfang Guan (22258765)

    Published 2025
    “…</p><p><br></p><p><br></p><p>---</p><p><br></p><p dir="ltr">## Directory structure (top-level)</p><p><br></p><p dir="ltr">- `rate_code/` </p><p>---</p><p><br></p><p dir="ltr">## Key scripts </p><p dir="ltr">- `rate_code/post_analysis_maskmissing/category_annotation/calculate_predicted_snp_by_category_maskfunctional.py` </p><p dir="ltr"> Script related to: calculate predicted snp by category maskfunctional.py</p><p dir="ltr">- `rate_code/revision/JARVIS/modules/jarvis/deep_learn_raw_seq/for_prediction_train_nn_model.py` </p><p dir="ltr"> Arg 'input_features' may take 1 of 3 possible values: - stuctured: using only structured features as input - sequence: using only sequence features as input - both: using both structured and sequence features as inputs</p><p dir="ltr">- `rate_code/revision/JARVIS/modules/jarvis/variant_classification/plot_gb_feature_importance.py` </p><p dir="ltr"> Script related to: plot gb feature importance.py</p><p dir="ltr">- `rate_code/external_test/calculate_AUC_dataset1_masksnp.py` </p><p dir="ltr"> Script related to: calculate AUC dataset1 masksnp.py</p><p dir="ltr">- `rate_code/post_analysis_maskmissing/category_annotation_calibration/calculate_predicted_snp_by_category.py` </p><p dir="ltr"> Script related to: calculate predicted snp by category.py</p><p dir="ltr">- `rate_code/post_analysis_maskmissing/category_annotation_calibration_masklabel/calculate_predicted_snp_by_category_new.py` </p><p dir="ltr"> Script related to: calculate predicted snp by category new.py</p><p dir="ltr">- `rate_code/post_analysis_maskmissing/category_annotation_calibration_masklabel/calculate_predicted_snp_by_category.py` </p><p dir="ltr"> Script related to: calculate predicted snp by category.py</p><p dir="ltr">- `rate_code/post_analysis_maskmissing/category_annotation_calibration_maskfunctional_maskrepeat/calculate_predicted_snp_by_category.py` </p><p dir="ltr"> Script related to: calculate predicted snp by category.py</p><p dir="ltr">- `rate_code/post_analysis_maskmissing/category_annotation/calculate_predicted_snp_by_category.py` </p><p dir="ltr"> Script related to: calculate predicted snp by category.py</p><p dir="ltr">- `rate_code/post_analysis_maskmissing/category_annotation/calculate_predicted_snp_by_category_nolabel.py` </p><p dir="ltr"> Script related to: calculate predicted snp by category nolabel.py</p><p dir="ltr">- `rate_code/post_analysis_maskmissing/exon_analysis_masklabel/calculate_predicted_snp_by_exon_mask.py` </p><p dir="ltr"> Script related to: calculate predicted snp by exon mask.py</p><p dir="ltr">- `rate_code/post_analysis_maskmissing/category_annotation_calibration_maskfunctional/calculate_predicted_snp_by_category.py` </p><p dir="ltr"> Script related to: calculate predicted snp by category.py</p><p dir="ltr">- `rate_code/post_analysis_maskmissing/exon_analysis/calculate_predicted_snp_by_exon_mask.py` </p><p dir="ltr"> Script related to: calculate predicted snp by exon mask.py</p><p dir="ltr">- `rate_code/code_halftrainmaskmissing_masklabel/base_excludeN_5fold_nonindelonlyintest_masklabel/predict_nucleotide_plot.py` </p><p dir="ltr"> Script related to: predict nucleotide plot.py</p><p dir="ltr">- `rate_code/code_halftrainmaskmissing_masklabel/base_excludeN_5fold_nonindelonlyintest_masklabel/predict_train.py` </p><p dir="ltr"> Script related to: predict train.py</p><p dir="ltr">- `rate_code/code_halftrainmaskmissing_masklabel/base_excludeN_5fold_indelonlyintest_masklabel/predict_nucleotide_plot.py` </p><p dir="ltr"> Script related to: predict nucleotide plot.py</p><p dir="ltr">- `rate_code/code_halftrainmaskmissing_masklabel/base_excludeN_5fold_indelonlyintest_masklabel/predict_train.py` </p><p dir="ltr"> Script related to: predict train.py</p><p dir="ltr">- `rate_code/code_halftrainmaskmissing_masklabel/plot/plot_indel_snp_auc.py` </p><p dir="ltr"> !…”
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    Raw data. by Honglei Pang (22693724)

    Published 2025
    Subjects:
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