Comparison of previous predictive models. by Saeid Rasouli (20370998)

“…<div><p>Background</p><p>Optic neuritis (ON) can be an initial clinical presentation of multiple sclerosis This study aims to provide a practical predictive model for identifying at-risk ON patients in developing MS.…”

Data for "A hollow fiber membrane permeance evaluation device demonstrating outside-in and inside-out performance differences" by Timothy Warner (20222838)

“…</li><li>Plot data derived from the above data sources.</li><li>Python code to generate figures from the plot data.…”

How neuromodulators control the excitability of neurons. by Domenico Guarino (20428000)

Pyramidal neuron spiking behaviour is either switched or scaled. by Domenico Guarino (20428000)

Dentate granule cells have polarised responses to neuromodulators switch spiking behaviour under neuromodulation. by Domenico Guarino (20428000)

Anisotropic Skyrmion and Multi-<i>q </i>Spin Dynamics in Centrosymmetric Gd₂PdSi₃: Data and Code by Matjaž Gomilšek (14278739)

“…Python script file<br>*.dat, [no extension] ... ASCII data file. …”

Code and data for evaluating oil spill amount from text-form incident information by Yiming Liu (18823387)

“…The code is written in Python and operated using Jupyter Lab and Anaconda. …”

Predicting coding regions on unassembled reads, how hard can it be? - Genome Informatics 2024 by Amanda Clare (98717)

“…The locations and directions of the predictions on the reads are then combined with the information about locations and directions of the reads on the genome using Python code to produce detailed results regarding the correct, incorrect and alternative starts and stops with respect to the genome-level annotation.…”

Evaluation and Statistical Analysis Code for "Multi-Task Learning for Joint Fisheye Compression and Perception for Autonomous Driving" by Basem Ahmed (18127861)

“…</p><p dir="ltr">The code includes:</p><ul><li><a target="_blank"><code>evaluate_mtl.py</code></a>: The main script for evaluating the performance of the proposed deep learning models (JointGAD) and traditional codecs (HEVC, JPEG2000) on the Woodscape and Fisheye8k datasets. …”

Quetzal: Comprehensive Peptide Fragmentation Annotation and Visualization by Eric W. Deutsch (13887)

“…We describe how Quetzal annotates spectra using the new Human Proteome Organization (HUPO) Proteomics Standards Initiative (PSI) mzPAF standard for fragment ion peak annotation, including the Python-based code, a web-service end point that provides annotation services, and a web-based application for annotating spectra and producing publication-quality figures. …”

Quetzal: Comprehensive Peptide Fragmentation Annotation and Visualization by Eric W. Deutsch (13887)

“…We describe how Quetzal annotates spectra using the new Human Proteome Organization (HUPO) Proteomics Standards Initiative (PSI) mzPAF standard for fragment ion peak annotation, including the Python-based code, a web-service end point that provides annotation services, and a web-based application for annotating spectra and producing publication-quality figures. …”

M-SGWR model by M. Naser Lessani (17817475)

“…<p dir="ltr">This project is related to the developemet of M-SGWR model. The repo contains all the necessary information, including the python code "M-SGWR", datasets and the instruction of how to reproduce the results presented in the article. …”

Excerpt from a provenance graph depicting the refinement process of a simulation model (SM1) during a simulation study. by Andreas Ruscheinski (7880759)

af3cli: Streamlining AlphaFold3 Input Preparation by Philipp Döpner (21028454)

“…With the release of AlphaFold3, modeling capabilities have expanded beyond protein structure prediction to embrace the inherent complexity of biomolecular systems, including nucleic acids, ions, small molecules, and their interactions. …”

Example provenance graph of exploring the difference between two simulation models by visualizing simulation data generated from two independent simulation experiments. by Andreas Ruscheinski (7880759)

Flowchart of the study participants. by Saeid Rasouli (20370998)

“…<div><p>Background</p><p>Optic neuritis (ON) can be an initial clinical presentation of multiple sclerosis This study aims to provide a practical predictive model for identifying at-risk ON patients in developing MS.…”

Feature importance of variables. by Saeid Rasouli (20370998)

“…<div><p>Background</p><p>Optic neuritis (ON) can be an initial clinical presentation of multiple sclerosis This study aims to provide a practical predictive model for identifying at-risk ON patients in developing MS.…”

Environmental Census: Modeling Synthetic Biology Ecological Risk with Metagenomic Enzymatic Data and High-Performance Computing by John Docter (22772100)

Modeling organoid deformation. by Julien Laussu (3554030)

“…B: Schema presenting the three different types of controlled loads tested in the FEM model. …”

Extreme delta - pydeltaRCM models by Octria Adi Prasojo (10507373)

“…<p dir="ltr">The folder contains the Python codes (.ipynb) to run the pyDeltaRCM models of extreme events impact on delta morphodynamics across five climate regions, along with the modelling results (.nc) presented by the same authors in the manuscript.…”