Dentate granule cells have polarised responses to neuromodulators switch spiking behaviour under neuromodulation. by Domenico Guarino (20428000)

Estimating dopamine effects on humans. by Domenico Guarino (20428000)

Segmentation module training details. by Khelina Fedorchuk (19130089)

Data features examined for potential biases. by Harry Hochheiser (3413396)

“…Representativeness of the population, differences in calibration and model performance among groups, and differences in performance across hospital settings were identified as possible sources of bias.…”

Analysis topics. by Harry Hochheiser (3413396)

“…Representativeness of the population, differences in calibration and model performance among groups, and differences in performance across hospital settings were identified as possible sources of bias.…”

JASPEX model by Olugbenga OLUWAGBEMI (21403187)

“…</p><p dir="ltr">We wrote new sets of python codes and developed python programming codes to rework on the map to generate the coloured map of Southwest Nigeria from the map of Nigeria (which represented the region of our study). …”

<b>Data and Code from 'The Perfect and Legitimate Bribe': A Transparent Record of Human-AI Collaboration in Legal Scholarship</b> by Joshua Stern (21748181)

“…</p><p dir="ltr">For optimal viewing of `collated-anonymized.txt`, a text editor that can handle long lines without word wrapping is recommended to preserve the indentation that represents the conversational branching structure.</p><p><br></p><p dir="ltr">### **Running Code/Software**</p><p dir="ltr">The provided scripts (`collator-ipynb.txt` and `sentence-ancestry-ipynb.txt`) are Jupyter Notebooks and require a Python 3 environment to run. …”

Data and code from: Hatchery-reared coho salmon develop less otolith deformities in tanks with alternating water flow directions by Leigh Gaffney (1389855)

“…</li><li>Measurements were generated by manually classifying otolith regions in Adobe Photoshop and calculating pixel coverage using a Python script.</li><li>Representative otolith images and details of the classification workflow are provided in the main manuscript figures and Methods section. …”

Prism and scutoid cell shape. by Sophie Theis (4126453)

Application to Drosophila gastrulation. by Sophie Theis (4126453)

Data and Code repository for the paper: <b>Visual loom caused by self- or object-movement elicits distinct responses in mouse superior colliculus</b> by Stefano Zucca (21686006)

“…Binned rates were transformed into z-scores by normalizing to the mean and standard deviation of firing rate across all stimulus conditions.</p><h2>Code Description</h2><p dir="ltr">Shared code contains both MATLAB and Python functions used in the analysis provided in the study. …”

Code and parameter package for long-term mapping and object-based typing of freeze–thaw colluvial deposits (1990–2024) along the Yunnan–Tibet corridor by Hui Ye (22308559)

“…Tested with Python 3.x/ArcGIS Pro (ArcPy) and the GEE Code Editor. …”

Advancing Solar Magnetic Field Modeling by Carlos António (21257432)

“…<br><br>We developed a significantly faster Python code built upon a functional optimization framework previously proposed and implemented by our team. …”

Cost functions implemented in Neuroptimus. by Máté Mohácsi (20469514)

“…<div><p>Finding optimal parameters for detailed neuronal models is a ubiquitous challenge in neuroscientific research. …”

<i>Spherical Textures</i> and machine-learning classifications of <i>C. elegans</i> germline nuclei. by Oane Gros (20636735)

Automatic classification of germline nuclei provides quantifications of meiotic progression. by Oane Gros (20636735)

Scope of our collection of pathogen models of metabolism. by Emma M. Glass (13102872)

“…The number in parentheses after the phylum name represents how many models are in that respective phylum. …”

[ relative elevation model data visualization for Data Bloom 2024 ] by Rusmiya Aqid (22189850)

“…<p dir="ltr">This visualization takes the digital elevation model (DEM) of a portion of the Colorado River and transforms it into a relative elevation model (REM); unlike DEM, REM shows the relative height above the river and can more clearly highlight river features. …”

Smart Reaction Templating: A Graph-Based Method for Automated Molecular Dynamics Input Generation by Julian Konrad (9609845)

“…Accurately modeling chemical reactions in molecular dynamics simulations requires detailed pre- and postreaction templates, often created through labor-intensive manual workflows. …”

Model fitting to neighborhood-level COVID-19 case data. by Renquan Zhang (13167533)

“…<p>(A), Simulations using model parameters estimated for the period from March 1, 2020 to December 13, 2020. …”