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code genetic » model genetic (Expand Search), wide genetic (Expand Search), co1 genetic (Expand Search)
code genetic » model genetic (Expand Search), wide genetic (Expand Search), co1 genetic (Expand Search)
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EvoFuzzy
Published 2024“…<p dir="ltr">EvoFuzzy - Source code and datasets</p><p dir="ltr">EvoFuzzy: Evolutionary fuzzy ensemble approach for reconstructing consensus genetic networks EvoFuzzy, an algorithm that integrates evolutionary and fuzzy concepts to combine gene regulatory networks (GRNs) derived from Boolean, regression, and fuzzy models. …”
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Code and data for Lambert and Ellner, "SDM meets eDNA: optimal sampling of environmental DNA to estimate species-environment relationships in stream networks", Ecography (2025)
Published 2025“…<p dir="ltr">This work extends existing eDNA-based species distribution models (SDMs) by presenting a hierarchical model for eDNA concentration data that fully accounts for how transport, mixing and loss affect sampling distributions. The code includes: (1) an iterative generalized least squares solution method for estimating model parameters, (2) a genetic algorithm for finding D-optimal sampling designs (i.e., the positioning of samples on a stream network that most accurately estimates species-environment relationships), and (3) generalized additive models for estimating the dependence of estimation accuracy on a stream network's topological and hydrologic properties.…”
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