Table_2_Developmental Regulation and Functional Prediction of microRNAs in an Expanded Fasciola hepatica miRNome.xlsx ‌ Caoimhe M. Herron (12069707)

“…<p>The liver fluke, Fasciola hepatica, is a global burden on the wellbeing and productivity of farmed ruminants, and a zoonotic threat to human health. …”

Table_4_Extensive Drug-Resistant Salmonella enterica Isolated From Poultry and Humans: Prevalence and Molecular Determinants Behind the Co-resistance to Ciprofloxacin and Tigecycli... ‌ Norhan K. Abd El-Aziz (7514258)

“…This study aimed to determine the prevalence and serotype diversity of XDR Salmonella in poultry flocks and contact workers and to elucidate the genetic determinants involved in the co-resistance to CIP and TIG. Herein, 115 Salmonella enterica isolates of 35 serotypes were identified from sampled poultry (100/1210, 8.26%) and humans (15/375, 4.00%), with the most frequent serotype being Salmonella Typhimurium (26.96%). …”

Spatial variation and clgassification of anthropogenic soils formed by long-term “<i>Dorotsuke”</i> soil-dressing in Andosols of the Omiya Upland along the Arakawa River, Japan ‌ Shokichi Wakabayashi (3872428)

“…<p><i>Dorotsuke</i>, a traditional winter off-season farming practice in the Omiya Upland along the Arakawa River, involved transporting alluvial soil on horseback to the upland, maturing it, and then applying it to Andosol fields. …”

Table_4_Comparison of Oyster Aquaculture Methods and Their Potential to Enhance Microbial Nitrogen Removal From Coastal Ecosystems.DOCX ‌ Paraskevi Mara (8890736)

“…Measured N₂ fluxes and expression of key genes involved in denitrification, anaerobic ammonium oxidation (anammox), and dissimilatory nitrate reduction to ammonium (DNRA) increased during mid-summer and into fall in both years primarily under bottom cages. …”

Image_4_Comparison of Oyster Aquaculture Methods and Their Potential to Enhance Microbial Nitrogen Removal From Coastal Ecosystems.tiff ‌ Paraskevi Mara (8890736)

“…Measured N₂ fluxes and expression of key genes involved in denitrification, anaerobic ammonium oxidation (anammox), and dissimilatory nitrate reduction to ammonium (DNRA) increased during mid-summer and into fall in both years primarily under bottom cages. …”

Data_Sheet_1_Genome-Wide Association Study Reveals PC4 as the Candidate Gene for Thermal Tolerance in Bay Scallop (Argopecten irradians irradians).PDF ‌ Xinghai Zhu (11152146)

“…Additionally, the SNP (15-5091-20379557-1) with the lowest P value was located in the transcriptional coactivator p15 (PC4) gene, which is involved in regulating DNA damage repair and stabilizing genome functions. …”

Table_2_Genetic variation and recombination analysis of the GP5 (GP5a) gene of PRRSV-2 strains in China from 1996 to 2022.xlsx ‌ Qin Luo (2182514)

“…Recombination analysis revealed that one recombination event occurred in 517 PRRSV-2 strains, this event involved recombination between lineage 8 and lineage 1. …”

Table_2_Comparison of Oyster Aquaculture Methods and Their Potential to Enhance Microbial Nitrogen Removal From Coastal Ecosystems.DOCX ‌ Paraskevi Mara (8890736)

“…Measured N₂ fluxes and expression of key genes involved in denitrification, anaerobic ammonium oxidation (anammox), and dissimilatory nitrate reduction to ammonium (DNRA) increased during mid-summer and into fall in both years primarily under bottom cages. …”

Table_1_Combining Multiple Approaches and Models to Dissect the Genetic Architecture of Resistance to Infections in Fish.xlsx ‌ Clémence Fraslin (5983904)

“…<p>Infectious diseases represent a major threat for the sustainable development of fish farming. Efficient vaccines are not available against all diseases, and growing antibiotics resistance limits the use of antimicrobial drugs in aquaculture. …”

Table_1_Linking farmers’ perceptions and management decision toward sustainable agroecological transition: evidence from rural Tunisia.DOCX ‌ Asma Souissi (18543823)

“…The study, conducted in the northwest of Tunisia in 2022–2023, involved focus groups, workshops, surveys, and questionnaires with various stakeholders. …”

Table_2_Oil Spill and Socioeconomic Vulnerability in Marine Protected Areas.xlsx ‌ Felipe Roberto da Silva (12572167)

“…Most enterprises (34.4%) were involved in the food sector, related to the ocean economy, and, therefore, highly vulnerable to oil spills. …”

Data_Sheet_2_Population response of intestinal microbiota to acute Vibrio alginolyticus infection in half-smooth tongue sole (Cynoglossus semilaevis).zip ‌ Yaotong Hao (15467570)

“…The function analysis revealed that the high-dose inflection group could increase the genes closely related to pathogen infection, involved in cell motility, cell wall/ membrane/envelope biogenesis, material transport and metabolism, and the pathways of quorum sensing, biofilm formation, flagellar assembly, bacterial chemotaxis, virulence factors and antibiotic resistances mainly from Vibrios within 72 h.…”

Data_Sheet_1_Population response of intestinal microbiota to acute Vibrio alginolyticus infection in half-smooth tongue sole (Cynoglossus semilaevis).XLSX ‌ Yaotong Hao (15467570)

“…The function analysis revealed that the high-dose inflection group could increase the genes closely related to pathogen infection, involved in cell motility, cell wall/ membrane/envelope biogenesis, material transport and metabolism, and the pathways of quorum sensing, biofilm formation, flagellar assembly, bacterial chemotaxis, virulence factors and antibiotic resistances mainly from Vibrios within 72 h.…”

DataSheet_1_Oil Spill and Socioeconomic Vulnerability in Marine Protected Areas.docx ‌ Felipe Roberto da Silva (12572167)

“…Most enterprises (34.4%) were involved in the food sector, related to the ocean economy, and, therefore, highly vulnerable to oil spills. …”

Table_3_Extensive Drug-Resistant Salmonella enterica Isolated From Poultry and Humans: Prevalence and Molecular Determinants Behind the Co-resistance to Ciprofloxacin and Tigecycli... ‌ Norhan K. Abd El-Aziz (7514258)

“…This study aimed to determine the prevalence and serotype diversity of XDR Salmonella in poultry flocks and contact workers and to elucidate the genetic determinants involved in the co-resistance to CIP and TIG. Herein, 115 Salmonella enterica isolates of 35 serotypes were identified from sampled poultry (100/1210, 8.26%) and humans (15/375, 4.00%), with the most frequent serotype being Salmonella Typhimurium (26.96%). …”

Table_3_Transcriptomics of early responses to purified Piscine orthoreovirus-1 in Atlantic salmon (Salmo salar L.) red blood cells compared to non-susceptible cell lines.xlsx ‌ Thomais Tsoulia (17456659)

“…The comparison of RBC to ASK and SHK-1 revealed immune cell features exclusively expressed in RBC, such as genes involved in chemotactic activity in response to inflammation. …”

Image_2_Genetic variation and recombination analysis of the GP5 (GP5a) gene of PRRSV-2 strains in China from 1996 to 2022.jpg ‌ Qin Luo (2182514)

“…Recombination analysis revealed that one recombination event occurred in 517 PRRSV-2 strains, this event involved recombination between lineage 8 and lineage 1. …”

Table_2_Combining Multiple Approaches and Models to Dissect the Genetic Architecture of Resistance to Infections in Fish.XLSX ‌ Clémence Fraslin (5983904)

“…<p>Infectious diseases represent a major threat for the sustainable development of fish farming. Efficient vaccines are not available against all diseases, and growing antibiotics resistance limits the use of antimicrobial drugs in aquaculture. …”

Table 1_Evaluation of clinical, analytical, and genotyping performance of Hex L1 real-time PCR coupled with high-resolution melting curve analysis for fowl adenovirus outbreak inve... ‌ Amina Kardoudi (22686524)

“…In this study, we aimed to evaluate the clinical, analytical, and genotyping performance of the Hex L1 PCR combined with High-Resolution Melting (HRM) Curve analysis for investigating recent IBH and AGE outbreaks in Morocco. The study involved 26 clinical samples collected from broiler and layer poultry farms suspected with IBH or AGE. …”

Data Sheet 1_Temporal changes in the transcriptome profile of Macrobrachium rosenbergii in response to decapod iridescent virus 1 infection.zip ‌ Jingwen Hao (9952821)

“…<p>The farming of Macrobrachium rosenbergii faces significant challenges due to infections caused by Decapod iridovirus 1 (DIV1). …”