Algorithm flow based on CL-EPIDTN. by Fang Yang (123514)

Representation of stability and interaction energy of the complex between TLR3 and the vaccine. by Saurav Kumar Mishra (13228369)

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An illustration of molecular interaction activity within the docked complex (TLR3-Vaccine). by Saurav Kumar Mishra (13228369)

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diaPASEF-Powered Chemoproteomics Enables Deep Kinome Interaction Profiling by Kathryn Woods (4689739)

“…We introduce our 2^nd generation (gen) kinobead competition and correlation analysis (kiCCA) for kinome PPI mapping. 2^nd gen kiCCA utilizes kinome affinity purification with kinase inhibitor soluble competition, data-independent acquisition with parallel accumulation serial fragmentation (diaPASEF) mass spectrometry (MS), and a redesigned CCA algorithm with improved selection criteria and the ability to predict multiple kinase interaction partners of the same proteins. …”

diaPASEF-Powered Chemoproteomics Enables Deep Kinome Interaction Profiling by Kathryn Woods (4689739)

“…We introduce our 2^nd generation (gen) kinobead competition and correlation analysis (kiCCA) for kinome PPI mapping. 2^nd gen kiCCA utilizes kinome affinity purification with kinase inhibitor soluble competition, data-independent acquisition with parallel accumulation serial fragmentation (diaPASEF) mass spectrometry (MS), and a redesigned CCA algorithm with improved selection criteria and the ability to predict multiple kinase interaction partners of the same proteins. …”

diaPASEF-Powered Chemoproteomics Enables Deep Kinome Interaction Profiling by Kathryn Woods (4689739)

“…We introduce our 2^nd generation (gen) kinobead competition and correlation analysis (kiCCA) for kinome PPI mapping. 2^nd gen kiCCA utilizes kinome affinity purification with kinase inhibitor soluble competition, data-independent acquisition with parallel accumulation serial fragmentation (diaPASEF) mass spectrometry (MS), and a redesigned CCA algorithm with improved selection criteria and the ability to predict multiple kinase interaction partners of the same proteins. …”

Table 1_Role of intercellular interactions on single cell and population level responses: considerations for multicellular bioreporter design.xlsx by Douglas Lin (10309772)

“…These results warrant further research into the application of different simulation algorithms and multicellular bioreporter design and modeling.…”

Data Sheet 1_Role of intercellular interactions on single cell and population level responses: considerations for multicellular bioreporter design.docx by Douglas Lin (10309772)

“…These results warrant further research into the application of different simulation algorithms and multicellular bioreporter design and modeling.…”

CFMM model framework. by Chong Zhang (418677)

“…However, the interactive modeling effect of the existing multimedia algorithms on this information must be improved, for instance, by deeply integrating product and interactive information. …”

Efficient Indexing of large-scale linked interval data improves long-read transcript discovery (The 19th Annual Lewis Landsberg Research Day) by Richard A. Schäfer (19165600)

The computed immunological and physicochemical features of the constructed vaccine. by Saurav Kumar Mishra (13228369)

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Representation of predicted B cell epitopes in the target protein via BepiPred 2.0 Server; yellow represents the epitopic, and green represents the non-epitopic region. by Saurav Kumar Mishra (13228369)

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An illustration of the tertiary structure of constructed vaccine candidate (A) The constructed initial structure of vaccine candidate (B) Illustration of improved vaccine structure... by Saurav Kumar Mishra (13228369)

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List of refined models obtained by GalaxyRefine along with different attributes. by Saurav Kumar Mishra (13228369)

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Illustration of the anticipated chronology of procedures in this work. by Saurav Kumar Mishra (13228369)

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Illustration of the Disulfide bond formulation in the vaccine. by Saurav Kumar Mishra (13228369)

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A graphical illustration of epitope-based vaccine construction. by Saurav Kumar Mishra (13228369)

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A list of final selected B cell peptides, including their position and immunological properties. by Saurav Kumar Mishra (13228369)

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Illustration of the identified conformational epitopes within the constructed vaccine in which the yellow sphere represents the epitopic region. by Saurav Kumar Mishra (13228369)

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The structural validation of the refined vaccine model. by Saurav Kumar Mishra (13228369)

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