Role of Organic and Conservation Agriculture in Ammonia Emissions and Crop Productivity in China حسب Peng Xu (17962)

"…Conventional agriculture with nitrogen (N) fertilizer applications, however, is a key source of ammonia (NH₃) emissions that cause severe haze pollution and impair human health. …"

<b>Leveraging protected areas for dual goals of biodiversity conservation and zoonotic</b> <b>risk reduction</b> حسب Li Yang (13558573)

"…Comparison of priority areas identified under different prioritization settings and algorithms at source resolutions of 1 km and 10 km, assessed using Jaccard similarity.…"

Algorithmic assessment reveals functional implications of GABRD gene variants linked to idiopathic generalized epilepsy حسب Ayla Arslan (17943365)

"…</p> <p>The study identifies specific variants (L111R, R114C, D123N, G150S, and L243P) in the coding region of the GABRD gene, which are predicted as deleterious by multiple algorithms. These variants are evolutionarily conserved, mapped onto the extracellular domain of the δ subunit, and associated with idiopathic generalized epilepsy.…"

Supplementary Data: Biodiversity and Energy System Planning - Queensland 2025 حسب Andrew Rogers (17623239)

"…</li></ul><h3>Analysis Scripts</h3><p dir="ltr">Complete set of R scripts for reproducing all analyses:</p><ul><li><b>percent cost increase_line plot.R</b>: Creates visualizations of energy cost impacts under different conservation scenarios</li><li><b>Zonation curves.R</b>: Generates conservation performance curves and coverage statistics</li><li><b>NPV_bar_plot.R</b>: Produces economic analysis plots with Net Present Value breakdowns</li><li><b>domestic_export_map_iterations.R</b>: Creates spatial maps of renewable energy infrastructure for domestic and export scenarios</li></ul><h2>Technical Specifications</h2><h3>Data Formats</h3><ul><li><b>Spatial Data</b>: ESRI Geodatabase (.gdb), Shapefile (.shp), GeoTIFF (.tif)</li><li><b>Tabular Data</b>: CSV, Microsoft Excel (.xlsx, .xls)</li><li><b>Analysis Code</b>: R scripts (.R)</li></ul><h3>Software Requirements</h3><ul><li><b>R</b> (≥4.0.0) with packages: sf, dplyr, ggplot2, readr, readxl, tidyr, furrr, ozmaps, ggpattern</li><li><b>ESRI ArcGIS</b> or <b>QGIS</b> for geodatabase access and spatial analysis</li><li><b>Zonation</b> conservation planning software (for methodology understanding)</li></ul><h3>Hardware Recommendations</h3><ul><li><b>RAM</b>: 16GB minimum (32GB recommended for full spatial analysis)</li><li><b>Storage</b>: 15GB free space for data extraction and processing</li><li><b>CPU</b>: Multi-core processor recommended for parallel processing scripts</li></ul><h2>Detailed Description of the VRE Siting and Cost-Minimization Model</h2><p><br></p><p dir="ltr">This section provides an in-depth description of the Variable Renewable Energy (VRE) siting model, including the software, the core algorithm, and the optimisation process used to determine the least-cost, spatially constrained development trajectory for VRE infrastructure in Queensland, Australia.…"

Cell number of gene cluster. حسب Litian Han (17350823)

"…Additionally, we implemented methods to identify conserved pseudotemporal gene modules across multiple samples. …"

Description of clusters in Differential Altas. حسب Litian Han (17350823)

"…Additionally, we implemented methods to identify conserved pseudotemporal gene modules across multiple samples. …"

Transcription clusters list in Fig 3E. حسب Litian Han (17350823)

"…Additionally, we implemented methods to identify conserved pseudotemporal gene modules across multiple samples. …"

Rule-Based PCT Overview. حسب Prateek Gupta (3174555)

Image2_Ecological niche modelling: a global assessment based on bibliometric analysis.JPEG حسب Banafsha Javeed (19229626)

"…Additionally, our analysis shows that the USA leads in Multiple Country Publications (MCP). The development of sophisticated software tools and algorithms coupled with remote sensing data has democratized ENM research, enabling scientists from diverse backgrounds to contribute to the field’s growth. …"

Image1_Ecological niche modelling: a global assessment based on bibliometric analysis.JPEG حسب Banafsha Javeed (19229626)

"…Additionally, our analysis shows that the USA leads in Multiple Country Publications (MCP). The development of sophisticated software tools and algorithms coupled with remote sensing data has democratized ENM research, enabling scientists from diverse backgrounds to contribute to the field’s growth. …"

Table_2_Automated detection and detection range of primate duets: a case study of the red titi monkey (Plecturocebus discolor) using passive acoustic monitoring.pdf حسب Silvy M. van Kuijk (16881867)

Table_3_Automated detection and detection range of primate duets: a case study of the red titi monkey (Plecturocebus discolor) using passive acoustic monitoring.pdf حسب Silvy M. van Kuijk (16881867)

DataSheet_1_Automated detection and detection range of primate duets: a case study of the red titi monkey (Plecturocebus discolor) using passive acoustic monitoring.pdf حسب Silvy M. van Kuijk (16881867)

Table_1_Automated detection and detection range of primate duets: a case study of the red titi monkey (Plecturocebus discolor) using passive acoustic monitoring.pdf حسب Silvy M. van Kuijk (16881867)

Data_sheet_1_Mangrove Loss and Gain in a Densely Populated Urban Estuary: Lessons From the Guangdong-Hong Kong-Macao Greater Bay Area.docx حسب Heng Wang (76752)

"…Mangrove area changes are quantified for the period 1990–2018 by analyzing multiple sources of satellite images by classification algorithms. …"

<b>Spatial modeling of gully density on the Qinghai-Tibet Plateau: Application of hyperparameter optimization in interpretable machine learning</b> حسب Zhoujiang Liu (22741966)

"…Various machine learning models were used, and different hyperparameter optimization algorithms were selected to train the models to obtain the best model. …"

DataSheet_8_Progress, challenge and prospect of plant plastome annotation.pdf حسب Xiao-Jian Qu (10450598)

"…We propose possible methods to judge pseudogenes and RNA-editing genes, jointly consider sequence similarity, customed algorithms, conserved domain or protein structure. We also propose the necessity of establishing a database of reference plastomes with standardized annotations, and put forward a set of quantitative standards for evaluating plastome annotation quality for the scientific community. …"

DataSheet_6_Progress, challenge and prospect of plant plastome annotation.pdf حسب Xiao-Jian Qu (10450598)

"…We propose possible methods to judge pseudogenes and RNA-editing genes, jointly consider sequence similarity, customed algorithms, conserved domain or protein structure. We also propose the necessity of establishing a database of reference plastomes with standardized annotations, and put forward a set of quantitative standards for evaluating plastome annotation quality for the scientific community. …"

DataSheet_3_Progress, challenge and prospect of plant plastome annotation.pdf حسب Xiao-Jian Qu (10450598)

"…We propose possible methods to judge pseudogenes and RNA-editing genes, jointly consider sequence similarity, customed algorithms, conserved domain or protein structure. We also propose the necessity of establishing a database of reference plastomes with standardized annotations, and put forward a set of quantitative standards for evaluating plastome annotation quality for the scientific community. …"

DataSheet_9_Progress, challenge and prospect of plant plastome annotation.pdf حسب Xiao-Jian Qu (10450598)

"…We propose possible methods to judge pseudogenes and RNA-editing genes, jointly consider sequence similarity, customed algorithms, conserved domain or protein structure. We also propose the necessity of establishing a database of reference plastomes with standardized annotations, and put forward a set of quantitative standards for evaluating plastome annotation quality for the scientific community. …"