MCCN Case Study 4 - Validating gridded data products حسب Donald Hobern (21435904)

"…<p dir="ltr">The MCCN project is to deliver tools to assist the agricultural sector to understand crop-environment relationships, specifically by facilitating generation of data cubes for spatiotemporal data. …"

Spatiotemporal Soil Erosion Dataset for the Yarlung Tsangpo River Basin (1990–2100) حسب peng xin (21382394)

"…</p><p dir="ltr"><b>Future R factors</b> We incorporated 25 Global Climate Models (GCMs) from CMIP6 for calculating the future R factors, selected via the NASA Earth Exchange Global Daily Downscaled Projections (NEX-GDDP-CMIP6) project (Table S3). The selection was based on the completeness of their time series and their alignment with the selected scenarios. …"

Streamlining a National Flood Assessment using a Flow Scheduler حسب eRNZ Admin (6438486)

"…In this workflow, cylc is principally used as a central tool to link the different models and loop through all the computational domains (based on flood plains and their catchments) and scenarios. …"

Behavioural machine activity for benign and malicious Win7 64-bit executables حسب Peter Burnap (19078697)

"…</li></ul><p><br></p><p><br></p><p><strong>Columns</strong></p><p><br></p><ul><li>sample_id: an identifier value for the samples (categorical)</li><li>vector: time in seconds since start of file execution (numeric)</li><li>malware: class label 0=benign, 1=malicious (categorical)</li><li>cpu_sysem: percentage of cpu being used to run programs in system kernel (numeric)</li><li>cpu_user: percentage of cpu being used to run programs in user space (numeric)</li><li>memory: bytes currently being used in memory (numeric)</li><li>swap: bytes currently being used in swap memory (numeric)</li><li>total_pro: total number of processes running (numeric)</li><li>max_pid: maximum process id held by a process (numeric)</li><li>rx_bytes: number of bytes being received (numeric)</li><li>tx_bytes: number of bytes being sent (numeric)</li><li>rx_packets: number of packets being received (numeric) </li><li>tx_packets: number of packets being sent (numeric)</li><li>test_set: True=sample belongs to test set, False=sample belongs to training set</li></ul><p><br></p><p><br></p><p><strong>Dataset 2 only:</strong></p><ul><li>family: malware type - value missing if unknown or benign (categorical)</li><li>variant: malware variant - value missing unknown or benign (categorical)</li><li>test-set: file was first seen before October (categorical)</li></ul><p><br></p><p>[1] <a href="https://www.virtualbox.org/wiki/Downloads">https://www.virtualbox.org/wiki/Downloads</a></p><p>[2] <a href="https://cuckoosandbox.org/">https://cuckoosandbox.org/</a> </p><p>[3] <a href="https://github.com/hyperic/sigar">https://github.com/hyperic/sigar</a> </p><p>[4] <a href="https://pypi.org/project/psutil/">https://pypi.org/project/psutil/</a></p><p>Research results based upon these data are published at http://doi.org/10.1016/j.cose.2018.05.010<br></p><p><br></p>…"

Pteredactyl: Patient Clinical Free-Text Redaction Software حسب Matt Stammers (14037525)

"…</p><p dir="ltr">This is why we created <a href="https://pypi.org/project/pteredactyl/" rel="noopener noreferrer" target="_blank">Pteredactyl</a> - a python module to help with redaction of clinical free text.…"

<b>Visium spatial transcriptomics data for individual oral squamous cell carcinoma (OSCC) patients</b> حسب Ken Furudate (13018584)

"…<b>Please note:</b> The gene expression data visualized in Loupe Browser is based on raw, un-normalized UMI counts.</li></ol><h2><b>Related Data Repositories</b></h2><ul><li>The raw sequencing reads for these samples are available at DDBJ under BioProject accession PRJDB13905 (<a href="https://ddbj.nig.ac.jp/search/entry/bioproject/PRJDB13905" rel="noopener" target="_blank">https://ddbj.nig.ac.jp/search/entry/bioproject/PRJDB13905</a>).…"

<i>Salmonella enterica </i>pangenome graph and variant call data for 539,283 genomes حسب ADAM RIVERS (18387663)

"…We transformed single nucleotide polymorphism (SNP) data into reduced dimensional representations which are tolerant of missing data based on disentangled variational autoencoders. TFRecord files were made with custom Python scripts that parsed the variant call formats (VCF) into sparse tensors and combined them with the <i>Salmonella</i> In Silico Typing Resource (SISTR) serotype data.…"

Mean Annual Habitat Quality and Its Driving Variables in China (1990–2018) حسب ChenXi Zhu (21374876)

"…</p><p dir="ltr">The dataset includes the following files:</p><p dir="ltr">A CSV file containing the mean annual values of the dependent variable (habitat quality) and the independent variables across China from 1990 to 2018, based on the data listed in Table 1.</p><p dir="ltr">(HQ: Habitat Quality; CZ: Climate Zone; FFI: Forest Fragmentation Index; GPP: Gross Primary Productivity; Light: Nighttime Lights; PRE: Mean Annual Precipitation Sum; ASP: Aspect; RAD: Solar Radiation; SLOPE: Slope; TEMP: Mean Annual Temperature; SM: Soil Moisture)</p><p dir="ltr"><br>A Python script used for modeling habitat quality, including mean encoding of the categorical variable climate zone (CZ), multicollinearity testing using Variance Inflation Factor (VIF), and implementation of four machine learning models to predict habitat quality.…"