Introduction to the iModulonMiner using public <i>B</i>. <i>subtilis</i> RNA-seq data as a case study. by Anand V. Sastry (6619310)

Overview of the <i>B</i>. <i>subtilis</i> iModulon structure. by Anand V. Sastry (6619310)

Examples of insights derived from iModulons. by Anand V. Sastry (6619310)

Estimating dopamine effects on humans. by Domenico Guarino (20428000)

Dataset for CNN-based Bayesian Calibration of TELEMAC-2D Hydraulic Model by Jose Zevallos (21379988)

“…</p><p dir="ltr">The dataset is organized into three ZIP files:</p><ul><li><b>DEPTHS.zip (319.5 MB)</b><br>This archive contains high-resolution GeoTIFF raster files representing water depth outputs from TELEMAC-2D simulations. …”

Dentate granule cells have polarised responses to neuromodulators switch spiking behaviour under neuromodulation. by Domenico Guarino (20428000)

BlueRecording simulates hippocampal LFP. by Joseph James Tharayil (21416715)

Simplified calculation methods produce inaccurate signals. by Joseph James Tharayil (21416715)

Digital Twin for Chemical Sciences by Jin Qian (19339035)

“…We first used the Data Generation.ipynb python notebook in the 1_inputs folder to generate the .csv files for one pressure condition, two pressure conditions, and six pressure conditions. …”

Map of stations sampled during the 2023 and 2022 cruises along the coastal NESAP. by Brandon J. McNabb (19337538)

“…The dashed contour line indicates the 200 m depth contour, using bathymetry data obtained from US National Geophysical Data Center (NGDC) ETOPO2 dataset (retrieved from: <a href="https://rda.ucar.edu/datasets/d759003/" target="_blank">https://rda.ucar.edu/datasets/d759003/</a>). …”

Sonification of Warming Stripes by Christopher Harrison (9448751)

“…The sonification was produced using the STRAUSS sonification Python package.</p><p dir="ltr">Here we release:<br>1. …”

Thermally Activated Resonant Tunnelling in GaAs/AlGaAs Triple Barrier Heterostructures by Craig Allford (19079081)

Attention and Cognitive Workload by Rui Varandas (11900993)

“…</p><p dir="ltr">The data for subject 2 do not include the 2nd part of the acquisition (python task) because the equipment stopped acquiring; subject 3 has the 1st (N-Back task and mental subtraction) and the 2nd part (python tutorial) together in the <code>First part</code> folder (file <code>D1_S3_PB_description.json</code> indicates the start and end of each task); subject 4 only has the mental subtraction task in the 1st part acquisition and in subject 8, the subtraction task data is included in the 2nd part acquisition, along with python task.…”

Bacterial persistence modulates the speed, magnitude and onset of antibiotic resistance evolution by Giorgio Boccarella (22810952)

“…</p><p dir="ltr">complete_data.xlsx</p><p dir="ltr">A single Excel file containing 18 sheets with data from all figures:</p><p dir="ltr">Sheet names and descriptions:</p><ul><li>Fig_1: Probability of emergence contour data</li><li>Fig_2_b: MIC evolution simulation data</li><li>Fig_2_c: Speed of resistance evolution data</li><li>Fig_2_d: Time to resistance data</li><li>Fig_2_a_d_time_series_sim7: Simulation time series data (representative simulation, low persistence)</li><li>Fig_2_a_d_MIC_values_sim7: MIC values from simulation (representative simulation, low persistence)</li><li>Fig_2_a_p_time_series_sim5: Simulation time series data (representative simulation, high persistence)</li><li>Fig_2_a_p_MIC_values_sim5: MIC values from simulation (representative simulation, high persistence)</li><li>Fig_3_a-b: Distribution plot simulation data</li><li>Fig_3_a-b_empirical: Distribution plot empirical data</li><li>Fig_4_a: Mutation count simulation data</li><li>Fig_4_b: Mutation count empirical data</li><li>Fig_4_c: Mutation functional data</li><li>Fig_5_a-b: Large-scale simulation results (heatmap data)</li><li>Fig_5_c_mic: MIC heatmap empirical data</li><li>Fig_5_c_extinction: Extinction heatmap empirical data</li><li>Fig_6: Population size analysis simulation data</li><li>S1_figure: Supplementary experimental survival data</li></ul><p dir="ltr">Column naming convention</p><p dir="ltr">All sheets use consistent, tidy column names.…”

Smart contract and interface code for Nature Energy "A general form of smart contract for decentralised energy systems management" by Lee Thomas (19655773)

Daily histograms of wind speed (100m), wind direction (100m) and atmospheric stability derived from ERA5 by Marc Imberger (6226619)

“…The following bins (left edges) have been used to create the histograms:</p><p dir="ltr">Wind speed: [0, 40) m/s (bin width 1 m/s)<br>Wind direction: [0,360) deg (bin width 15 deg)<br>Stability: 5 discrete stability classes (1: very unstable, 2: unstable, 3: neutral, 4: stable, 5: very stable)</p><p><br></p><p dir="ltr"><b>Main Purpose:</b> The dataset serves as minimum input data for the CLIMatological REPresentative PERiods (climrepper) python package (https://gitlab.windenergy.dtu.dk/climrepper/climrepper) in preparation for public release).…”

[ relative elevation model data visualization for Data Bloom 2024 ] by Rusmiya Aqid (22189850)

<b>Dataset for manuscript: </b><b>Phylogenetic and genomic insights into the evolution of terpenoid biosynthesis genes in diverse plant lineages</b> by Puguang Zhao (19023065)

“…After extracting the gene IDs, make sure to add a column header named "ID" in the output file (DXR.xlsx).</p><p dir="ltr"> Python Scripts (.py): These three scripts are executed in Visual Studio Code, using Python 3.10.4 as the runtime environment.…”

Building footprtints from 1970s Hexagon spy satellite images for four global urban growth hotspots by Franz Schug (10165159)

“…</p> <p><strong>Processing environment</strong></p> <p>This research has been conducted using Python for ESRI ArcGIS Pro version 3.2.1 and the TensorFlow package. …”

Methodological overview. by Jinming Xiao (12517096)

“…<p>(A) The source reconstruction of TMS-evoked potential of each subject was performed using dSPM method based on MNE software library. The time series of cortical activity were extracted through Schaefer 200 parcellation atlas. …”