Data Sheet 1_Suppressed intestinal secondary bile acids in moxifloxacin-induced hyperglycemia: studies in normal and diabetic GK rats.docx by Yewen Sun (8334138)

“…Meanwhile, we observed that the expression of intestinal TGR5 and FXR significantly downregulated, whereas CYP7A1 expression in liver was increased in GK rats after MFLX treatment. …”

Differences in lesion development of slow- and fast-growing meat-type chickens after experimental challenge with <i>Enterococcus cecorum</i> by Amanda Rosenbaum (19074302)

“…Additionally, circulating monocytes were increased and heterophil/lymphocyte (H/L) ratios were decreased in SG chickens compared to FG chickens. We may speculate that SG chickens were less affected by the EC-associated disease due to a more efficient innate immune response and may more vigorously control extra-intestinal colonization after translocation from the intestine. …”

Raw data for main and supplemental figures by Runhua Han (20455670)

“…However, the impact of ProQ in many pathogenic bacteria remains poorly understood. In this study, we investigated the role of ProQ in enterohaemorrhagic <i>Escherichia coli</i> (EHEC), a non-invasive intestinal pathogen. …”

Table 1_Inflammatory biomarkers and therapeutic potential of milk exosome-mediated CCL7 siRNA in murine intestinal ischemia-reperfusion injury.docx by WenDong Chen (20582978)

“…</p>Methods<p>Using transcriptome sequencing in a mouse model of IIRI, we identified potential biomarkers that were significantly upregulated in the IIRI group compared to the sham group. …”

Thermogenetic activation in male flies. by Joseph D. Jones (13883524)

“…<b>(D)</b> Box plots of nighttime sleep bout duration for flies presented in A. Two-way repeated measures ANOVA followed by Sidak’s multiple comparisons revealed that control and most FBS lines show a significant decrease in nighttime sleep bout duration between 22 °C and 31 °C, and 4 sleep-promoting FBS lines show no difference between 22 and 31 °C (FBS42, FBS53, FBS81, and FBS84) while FBS45 and FBS68 show an increase in nighttime sleep bout duration at 31 °C. …”

Data Sheet 2_Modulation of gut microbiota by Gardeniae Fructus oil exerts TLR4/NF-κB/NLRP3 pathway-mediated antidepressant effects based on transcriptomics and fecal transplantatio... by Man Han (8444859)

“…</p>Results<p>Compared with the CON group, mice in the CUMS group showed significant depressive-like behavior, pathological damage to the hippocampus and colon tissues, significant decrease in levels of 5-HT, DA, and BDNF in the hippocampus, significant increase in levels of IL-1β, IL-6, TNF-α, DAO, and LPS in serum, significant decrease in colonic tight junction protein expression, and significant increase in protein expression of TLR4, p-NF-κB, NLRP3, ASC, and IL-1β in the hippocampus (P < 0.01); Compared with the CUMS group, the FMT group could effectively improve the above situation (P < 0.05, P < 0.01), whose therapeutic effect was second only to the OGF group (P < 0.01), while ABX + OGF group did not show obvious therapeutic effect.…”

Data Sheet 1_Modulation of gut microbiota by Gardeniae Fructus oil exerts TLR4/NF-κB/NLRP3 pathway-mediated antidepressant effects based on transcriptomics and fecal transplantatio... by Man Han (8444859)

“…</p>Results<p>Compared with the CON group, mice in the CUMS group showed significant depressive-like behavior, pathological damage to the hippocampus and colon tissues, significant decrease in levels of 5-HT, DA, and BDNF in the hippocampus, significant increase in levels of IL-1β, IL-6, TNF-α, DAO, and LPS in serum, significant decrease in colonic tight junction protein expression, and significant increase in protein expression of TLR4, p-NF-κB, NLRP3, ASC, and IL-1β in the hippocampus (P < 0.01); Compared with the CUMS group, the FMT group could effectively improve the above situation (P < 0.05, P < 0.01), whose therapeutic effect was second only to the OGF group (P < 0.01), while ABX + OGF group did not show obvious therapeutic effect.…”

Effect of <i>INS-19</i> and <i>INS-20</i> gene knockout on the growth of <i>Cryptosporidium parvum</i>. by Yue Huang (285485)

“…At the peak of infection, mice infected with the <i>Δins-19</i> line showed a threefold decrease in fecal luciferase activity compared to those infected with the IId-GFP line, while those infected with the <i>Δins-20</i> line showed a 6-27-fold decrease in fecal luciferase activity. …”

Data Sheet 1_YOLOv8 forestry pest recognition based on improved re-parametric convolution.docx by Lina Zhang (112887)

“…First, we proposed RepLightConv to replace conventional convolution in HGNetV2, forming the Rep-HGNetV2 backbone, which significantly reduces the number of model parameters. …”

AjMLKL is involved in 10⁸ CFU/mL AJ01 induced lytic coelomocyte death independent on its phosphorylation. by Kaiyu Chen (11691918)

“…Coelomocyte viability was significantly increased (L), and coelomocytes plasma membrane disruption (M) and the percentage of Annexin V+/PI+ coelomocytes significantly decreased (N). …”

Data Sheet 1_The impact of gradient variable temperature fermentation on the quality of cigar tobacco leaves.pdf by Qianying Zhang (2391760)

“…A total of 17 chemicals significantly decreased and six increased, and the decline of microbial populations persisted. …”

Image 1_PipC affects the virulence of Salmonella enterica serovar Enteritidis and its deletion strain provides effective immune protection in mice.tif by Lu Zhang (50563)

“…Meanwhile, the expression levels of SPI-1-related genes (invH, sipA, sipB, sipC, sopB, and sopE2) and SPI-2-related genes (spvB, ssrA, orf245, ssaS, ssaT, ssaU, sseB, and sseD) encoding the Salmonella type III secretion system (T3SS) were found to be decreased, leading to a significant reduction in the bacteria’s invasion and intracellular survival abilities. …”

The effect of Tawny crazy ants on the abundance of aboveground insect abundance in Texas by Ryan Reihart (9174179)

“…We also found that in areas where <i>N. fulva </i>were abundant, there was a significantly greater abundance of honeydew-producing hemiptera from the Cicadellidae family, which is a likely factor aiding in the dominance and further spread of <i>N. fulva</i>. …”

Data and code for "Sympathetic vasomotion as an early marker of hemorrhage." by Peter Pellegrino (20875475)

“…The difference in the vasomotion profiles between the innervated and denervated kidneys increased significantly prior to increases in heart rate or decreases in blood pressure. …”

Supplementary Figures_Fainshtein.pdf by Kfir Sharabi (21415808)

“…Furthermore, we show that depleting <i>Hdac1</i> in mouse primary hepatocytes and liver tissue reduces glucose production, consistent with decreased PGC-1α activity. …”

Supplementary file 1_Comparison of the ruminal microbiome responses of temperate and tropically adapted beef steers to dietary supplementation with monensin.docx by Ross L. Thorn (22688840)

“…The qPCR assays indicated significantly lower ruminal methanogen contents (mcrA gene; p < 0.01) and a reduced methanogen/prokaryote ratio (MPR; p < 0.001) in monensin-fed steers compared with the control. …”

Image 2_ATG16L1 promotes cell migration and invasion in high glucose–induced retinal capillary endothelial cells.tif by Xinxiao Gao (21717197)

“…This study investigated the mechanisms underlying the expression of ATG16L1, a potential biomarker of DR.</p>Methods<p>We investigated the role of ATG16L1 in high glucose (HG)–induced retinal capillary endothelial cells (RCECs). …”

Image 1_ATG16L1 promotes cell migration and invasion in high glucose–induced retinal capillary endothelial cells.tif by Xinxiao Gao (21717197)

“…This study investigated the mechanisms underlying the expression of ATG16L1, a potential biomarker of DR.</p>Methods<p>We investigated the role of ATG16L1 in high glucose (HG)–induced retinal capillary endothelial cells (RCECs). …”

Flow cytometry by Tingting LIAO (21775841)

“…Flow cytometry results showed that compared with normal cells, there was no significant difference in apoptosis rate after transfection of mimics NC and inhibitor NC, but significantly increased apoptosis rate after transfection of miR-126-3p inhibitor and significantly decreased apoptosis rate after transfection of miR-126-3p inhibitor.…”

Supplementary file 1_The effect of development on cortical auditory evoked potentials in normal hearing listeners and cochlear implant users.docx by Eun Kyung Jeon (2032222)

“…</p>Results<p>Both onset and ACC responses were present across groups, with P1 latency decreasing significantly with age in NH and CI listeners. …”