Results from genome-wide European ancestry meta-analysis for each independent lead variant demonstrating genome-wide significance (p < 5e-8) in at least one phenotype.

<p>Columns include chromosome (Chr), position in hg38 (Pos), reference and alternate (effect) alleles (Ref/Alt), nearest gene, alternate allele frequency (AAF) average, standard error, and min/max across POFC1, POFC2, and GENEVA OFC, p-values and direction of effects for POFC1, POFC2, and GENE...

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Main Author:	Jenna C. Carlson (3950024) (author)
Other Authors:	Xinyi Zhang (36040) (author), Zeynep Erdogan-Yildirim (22339770) (author), Terri H. Beaty (9033168) (author), Azeez Butali (7410884) (author), Carmen J. Buxó (10576121) (author), Lord J.J. Gowans (7410833) (author), Jacqueline T. Hecht (8605047) (author), Ross E. Long (10176353) (author), Lina Moreno (134602) (author), Jeffrey C. Murray (7410881) (author), Ieda M. Orioli (10576118) (author), Carmencita Padilla (10576112) (author), George L. Wehby (9670086) (author), Eleanor Feingold (10018) (author), Elizabeth J. Leslie-Clarkson (20772341) (author), Seth M. Weinberg (8605056) (author), Mary L. Marazita (8605059) (author), John R. Shaffer (9031025) (author)
Published:	2025
Subjects:	Genetics Molecular Biology Biotechnology Evolutionary Biology Developmental Biology Cancer Mental Health Infectious Diseases Virology previously reported signal potential regulatory effects offer new clues novel association within nonsyndromic orofacial clefts embryonic facial development craniofacial enhancer activity biological processes result lead variant rs77075754 lead variant rs584402 lead variant rs4735314 lead variant rs17168118 three cohorts totaling observed novel association newly reported loci isolated cleft lip environmental risk factors five ofc phenotypes genes also overlapped div >< p orofacial cleft risk identify novel ofc without cleft palate xlink "> cl xlink "> also observed risk loci risk genes intronic variant intergenic variant ofc risk three regions identify subtype known ofc wide multi well characterized tissue twas tanc2 </ specific signals rbfox1 </ performed multi p ], ntn1 </ molecular mechanisms maximize power major hurdle grouped types esrp1 </ cald1 </ ancestry study
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Results from genome-wide European ancestry meta-analysis for each independent lead variant demonstrating genome-wide significance (p < 5e-8) in at least one phenotype.

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