Additional file 1 of Vispro improves imaging analysis for Visium spatial transcriptomics

Additional file 1 of Vispro improves imaging analysis for Visium spatial transcriptomics

Additional file 1: Table S1. List of spatial transcriptomics analysis tools. Provides an overview of existing tools, including name, publication year, citation, and usage of histology images. Also indicates tool capabilities across six functions: image processing, full tissue extent handling, fiduci...

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Bibliographic Details
Main Author: Huifang Ma (3182607) (author)
Other Authors: Xingyuan Zhang (1551676) (author), Yilong Qu (21569543) (author), Anru R. Zhang (14196320) (author), Zhicheng Ji (4901413) (author)
Published: 2025
Subjects:
Artificial Intelligence and Image Processing
spatial domain detection
accompanying histology images
tissue region detection
disconnected tissue areas
fiducial marker detection
vispro includes modules
enhancing image quality
including tissue
fiducial markers
vispro improves
introduce vispro
image restoration
image registration
often degraded
histological context
hindering interpretation
downstream analyses
background regions
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