tSNE plot of all pockets of all eleven species colored by different ligand classes.

<p>The most abundant ligand class is “nucleobases/nucleosides/nucleotides”, which are mostly found on the right side of the tSNE plot. While glycan binding sites cluster well, the binding sites for other ligand classes are found in different regions of the tSNE plot. An interactive plot for fu...

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Bibliographic Details
Main Author:	Hanne Zillmer (21782030) (author)
Other Authors:	Dirk Walther (32589) (author)
Published:	2025
Subjects:	Biophysics Biochemistry Evolutionary Biology Ecology Cancer Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified unveil differentiating features therefore potentially diversified selected physicochemical properties reliably predicted 3d linear scaling law discern evolutionary trends dimensional feature space potential binding sites distinct binding sites global pocketome maps binding sites pocketome universe global cross binding pockets xlink "> resulting set provide informative proteomes increased protein domains projection plots grew less e ., different kingdoms comprehensive view biological significance biological implications alphafold database
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tSNE plot of all pockets of all eleven species colored by different ligand classes.

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