Run time and reactions per second for different simulators.

<p>The fission yeast model is executed until 1000 minutes (20 replications). The values in parenthesis refer to executing ML-Rules 3 as WebAssembly code. The ML-Rules 2 implementation of the model contains ten species and 20 rules. The ML-Rules 3 version of the model consists of 7 species and...

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Bibliographic Details
Main Author:	Till Köster (11287803) (author)
Other Authors:	Philipp Henning (4382479) (author), Tom Warnke (19995507) (author), Adelinde Uhrmacher (7880765) (author)
Published:	2024
Subjects:	Biophysics Immunology Cancer Biological Sciences not elsewhere classified Mathematical Sciences not elsewhere classified Information Systems not elsewhere classified static compartmental hierarchy integrate compartmental changes associated models without integrating compartmental dynamics xlink "> compartmentalization rust programming language efficient simulation engine cell biological processes based stochastic simulation compartmental dynamics simulation engine biological models fast simulation existing cell wide variety whose syntax two orders slightly adapt modeling language many tools low barrier existing algorithms based modeling based language based implementation
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Run time and reactions per second for different simulators.

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