Sensitivity and specificity of the synthetic communities before and after applying a threshold and the area under the curve for SynCom-1, SynCom-2 and SynCom-3 replicates.

Sensitivity and specificity of the synthetic communities before and after applying a threshold and the area under the curve for SynCom-1, SynCom-2 and SynCom-3 replicates.

<p>Sensitivity and specificity of the synthetic communities before and after applying a threshold and the area under the curve for SynCom-1, SynCom-2 and SynCom-3 replicates.</p>

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Bibliographic Details
Main Author:	Rokaiya Nurani Shatadru (22656316) (author)
Other Authors:	Natalie E. Solonenko (5280548) (author), Christine L. Sun (22656319) (author), Matthew B. Sullivan (7419248) (author)
Published:	2025
Subjects:	Microbiology Ecology Infectious Diseases Virology Environmental Sciences not elsewhere classified Biological Sciences not elsewhere classified Mathematical Sciences not elsewhere classified viruses increasingly appear understudied viral taxa synthetic communities provides relative low resolution natural soil samples minimal phage abundances impose key constraints expanded genomic catalogs >- score thresholding host linkage studies host genomic fragments predictions – particularly least 10 studies div >< p c sample preparations accuracy remains unknown host linkages inferred 15 %) levels specificity ), though based bioinformatic approaches 5 </ sup host linkages retained ), bioinformatic methods based approaches 43 %) host interactions host inferences host identification z </ silico </ family levels ≥ 0 studied climate scaling cultivation respectively ). relatively high predictions generated nine phages modest improvements methodological guidelines machine learning known interactions incorrect matches dramatically improved detection limits critical soils c sequencing c performance c alone
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