Recombinant mapping narrows region of interest to identify a loss-of-function allele of <i>mttp.</i>

<p>A) markers A<sub>a</sub> and B<sub>a</sub> were outputted by WheresWalker and used to genotype <i>arches</i> mutants in order to identify recombinants. M and F denote male and female parents, respectively. PCR product sizes for wild-type and mutant (highl...

Full description

Saved in:
Bibliographic Details
Main Author: McKenna Feltes (11242085) (author)
Other Authors: Aleksey V. Zimin (8363328) (author), Sofia Angel (21714119) (author), Nainika Pansari (21714122) (author), Monica R. Hensley (3133671) (author), Jennifer L. Anderson (15991713) (author), Meng-Chieh Shen (4608190) (author), Mackenzie Klemek (21714125) (author), Yi Shen (152956) (author), Vighnesh S. Ginde (21714128) (author), Hannah Kozan (21714131) (author), Nhan V. Le (21714134) (author), Vivian P. Truong (21714137) (author), Meredith H. Wilson (6816489) (author), Steven L. Salzberg (8363331) (author), Steven A. Farber (9217109) (author)
Published: 2025
Subjects:
Tags: Add Tag
No Tags, Be the first to tag this record!
Description
Summary:<p>A) markers A<sub>a</sub> and B<sub>a</sub> were outputted by WheresWalker and used to genotype <i>arches</i> mutants in order to identify recombinants. M and F denote male and female parents, respectively. PCR product sizes for wild-type and mutant (highlighted) products are as indicated. B) Points representing A<sub>a</sub> (red) and B<sub>a</sub> (blue) marker locations and horizontal lines representing the estimated distance to the causative mutation are overlaid on the SNP index for the <i>arches</i> interval (chromosome 1: 2.46-13.86 Mb). The vertical dashed line indicates the location of <i>mttp</i>, the causative locus. C) quantification of ApoBb.1-nanoluciferase levels at 3 dpf. Mean ± standard deviation, N = 4-5 clutches, n = 2-8 animals/datapoint. P < 0.05 by two-way ANOVA with Geisser-Greenhouse correction and Tukey’s multiple comparisons test. * vs. respective wild-type, ^ vs <i>c655</i>/ + , $ vs <i>c655</i>/c655, # vs <i>stl</i>/stl. D) Images of whole-animal ApoBb.1-nanoluciferase distribution in <i>arches</i> and <i>stl</i> mutants at 3 dpf. E) Brightfield images of mutant and wild-type animals from 2-4 dpf. For D and E, scale bar represents 1 mm.</p>